Planococcus sp. PAMC 21323: Plano_1118
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Entry
Plano_1118 CDS
T03510
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pln
Planococcus sp. PAMC 21323
Pathway
pln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Plano_1118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_1118
Enzymes [BR:
pln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Plano_1118
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Plano_1118
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Plano_1118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_8
DCP1
Motif
Other DBs
NCBI-ProteinID:
AIY05083
UniProt:
A0A0B4RA91
LinkDB
All DBs
Position
1153032..1153901
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AA seq
289 aa
AA seq
DB search
MPELPEVEGVVRQIRPVSIGKKIEAVAVSDVIRLSKENGKEAIIKRLETDRFIENITGAQ
IVHVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYVDQLQSIPEDKFRRHVHIVLTLSDG
NLLAFSDIRRFGEMRVLQEEGDFPPLLLMAPEPFDDGALEHFLAMAESSKYNNKAIKEII
MDGQIISGCGNIYATEALFKMKIHPKRAASRISRKRKIELFKSIVAILLESIRAGGSTIS
DYRDINGESGNMQDRFGMYGKKQCTNCGTDTKTLKIGGRASVYCPTCQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttccagaagtcgaaggagttgttcggcaaatccgccctgtttcgattggt
aaaaaaattgaggctgtagcggtgtcggacgtcatccgcttatcgaaagaaaatggcaaa
gaagccattattaaacgattagaaactgatcgttttatcgaaaatataacaggtgcacaa
attgttcatgtagaacgtcgcagcaaatatatttattttacgttacgaaaagacaatgaa
tttttacttgtaaatcatttgggaatgtctggagcttggttctatgttgaccagctccag
tccattccggaggataaatttcgacgtcatgttcatattgtgttgactttaagtgatggc
aatttgttggcgttttcagacattcgtcgttttggtgaaatgcgggtattgcaagaagaa
ggagattttccaccgctactattaatggcgcctgaaccttttgatgatggcgcacttgag
cattttcttgcaatggcagaaagctcgaaatacaacaataaagcaattaaggaaatcatt
atggatgggcaaattatttctggctgcggcaatatatacgctacagaagcgctctttaaa
atgaaaattcatccgaaacgtgctgctagtcgcattagccggaagcggaaaatagaattg
ttcaaatcgattgttgctattttgctcgagagtattagagcgggtggcagtacaatttca
gattaccgcgatataaacggtgaatcaggcaacatgcaagaccgttttggaatgtatggc
aaaaaacaatgcacaaattgcggtacagatacaaagaccttaaaaattggcggtcgggct
tctgtttattgcccgacatgtcagaaatga
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