Planococcus sp. PAMC 21323: Plano_1306
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Entry
Plano_1306 CDS
T03510
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pln
Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pln03019
]
Plano_1306
03009 Ribosome biogenesis [BR:
pln03009
]
Plano_1306
Enzymes [BR:
pln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Plano_1306
Messenger RNA biogenesis [BR:
pln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Plano_1306
Ribosome biogenesis [BR:
pln03009
]
Prokaryotic type
rRNA helicases
Plano_1306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIY05271
UniProt:
A0A0B4RB92
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All DBs
Position
1339305..1340600
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AA seq
431 aa
AA seq
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MTKFNEYPFKPFLLEAVEKLGFTEPTQIQKEMMPHILKGTSAIGQSHTGTGKTHSFIIPI
VERIDVSKQEVQAVISAPTRELGTQIFNELQKLVVGSGIEVKSFIGGTDKQRSINKLKTQ
PHIVVGTPGRLRDLVKENALLVHTGKILVIDEADLAFDLGFIEEIDQVAGKMKDDLEMYV
FSATIPEKLKPFLKKYMESPVHVKIGDKRPTADGLDFYLVPVRSKKKMERLQDVMKVINP
YLAIIFVNTRTNADYVADQLAKEGIRVGRVHGDLAPRERVKMMRQIRDLEYQYIVATDLA
ARGIDIQGISHVINYELPEDLEFFIHRVGRTARAGMKGLAITLFKPEEDDAIVRIEKMGI
PFQQKDIVKGEFVDLKERHSRTTRVKKTDAADAKAKTMVHKPKKVRPMYKKKMKWKMDEI
KKMERRKNRKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattcaacgaatacccattcaagccgtttctattagaagcggtagaaaaactt
ggttttacagagccgacacagattcaaaaggaaatgatgccccatatattgaaaggcaca
agtgcaattggacaatcccacacagggactggaaaaacgcatagtttcattattccaatt
gtagaacgtattgacgtcagcaaacaggaagtgcaggcggtaatttcagcaccgacacgt
gaacttggaacgcagatcttcaacgagttgcaaaaattagttgttggatcgggcattgaa
gtaaaatcgtttatcggtggtacagacaagcaacgttcgattaacaaattaaaaacacaa
ccacatatcgtagttggtactccgggtcgtttgagagacttagtgaaagaaaacgcgtta
ttggtacacacaggtaaaattcttgtaattgatgaagcagatttggctttcgatcttggt
tttatcgaagaaattgaccaagttgctgggaaaatgaaagacgatctagaaatgtatgtc
ttttcagcgacaattcctgaaaagttaaaacctttcttgaaaaaatacatggaatcacca
gttcatgtgaaaattggcgataaacgtccaactgcagatggcttagacttttatcttgtg
ccagttcgtagcaagaaaaaaatggagcgcttgcaggatgtgatgaaagtaatcaatccg
tatttagccatcatttttgttaacacacgtacaaatgcagattatgtggcagaccaatta
gcaaaagaaggcattcgtgtcggtcgtgtacacggcgatttagcacctcgtgagcgcgtt
aaaatgatgcgtcaaattcgtgacttggaatatcaatatattgtggctacagatctcgct
gctcgtggtattgacattcaaggcataagccatgtcatcaactacgaattgccagaagac
ctggaattctttattcaccgcgtaggccgtacagctcgtgcaggaatgaaaggattagcg
ataacgttattcaagccagaagaagatgatgcgattgttcgtattgaaaaaatgggcatt
ccattccagcaaaaagatattgtcaaaggcgaatttgtcgacttgaaagaacgtcacagc
cgtacaacacgcgttaaaaaaacggatgcagctgatgcaaaagcgaaaacaatggttcac
aaaccgaaaaaagtaagaccgatgtacaagaagaagatgaagtggaaaatggacgaaatc
aaaaaaatggaacgtcgtaaaaatcgtaaaaaataa
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