KEGG   Planococcus sp. PAMC 21323: Plano_1791
Entry
Plano_1791        CDS       T03510                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pln  Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:pln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pln03032]
    Plano_1791
   03036 Chromosome and associated proteins [BR:pln03036]
    Plano_1791
   03400 DNA repair and recombination proteins [BR:pln03400]
    Plano_1791
DNA replication proteins [BR:pln03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Plano_1791
Chromosome and associated proteins [BR:pln03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Plano_1791
DNA repair and recombination proteins [BR:pln03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Plano_1791
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2 Rpf1_C
Other DBs
NCBI-ProteinID: AIY05756
UniProt: A0A0B4RCN8
LinkDB
Position
complement(1807496..1807768)
AA seq 90 aa
MNKTELVNSVAEAAELSRKDAAKAVDAAFETIQDALTKGEKVQLIGFGNFEVRERAARKG
RNPQTGAEIEIAASKVPAFKPGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattagtgaactctgttgctgaagcagctgaactttcacgtaaagac
gctgccaaagcagttgacgctgcatttgagacgattcaagacgctttaactaaaggtgaa
aaagtacagttgatcggattcggtaactttgaagtacgcgaacgcgcggcccgcaaagga
cgtaacccgcaaactggtgctgaaatcgaaatcgctgcaagcaaagttcctgcatttaag
ccaggtaaagcgcttaaagacgcagtgaagtaa

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