Planococcus sp. PAMC 21323: Plano_1806
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Entry
Plano_1806 CDS
T03510
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pln
Planococcus sp. PAMC 21323
Pathway
pln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Plano_1806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pln03019
]
Plano_1806
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_1806
Enzymes [BR:
pln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plano_1806
Messenger RNA biogenesis [BR:
pln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Plano_1806
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Plano_1806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AIY05771
UniProt:
A0A0B4RCQ2
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All DBs
Position
complement(1820221..1821648)
Genome browser
AA seq
475 aa
AA seq
DB search
MNLEKLLYTTYGFSSFRPGQKEVIEKIVAGEDVIALLPTGMGKSICYQLPAKILPDSILI
VSPLLSLMQDQVAQLKKMGEKSVVAINSFLKPEDKERIMKKLGSYKFIFISPEMLVQPFV
KKKLQEIRVSLLVADEAHCISQWGFDFRPDYLRISEILPDLKFPQVLALTATATDKVTEE
IKEYLALIKPFIYCHPMDRKNIVYDIKKFEDTHKKLEFLKDFILKFKGPGIIYAGTRKKS
QELSMLLTEQGISSAFYHGGMEHQDRVFVQQQFQNREVEWICSTNAFGMGVHIANIRQVI
HFQVPTSIEGYVQEVGRAGRDGLPALATLLYAQGDEALLESLVTDDLPTRHEIEAVFNDG
PSATYLIDRGIVRETAFRVIAYWMTKLPLAGVISQIEGLRKGKKKQAAKIRELISSDNCI
RSYIISSFDQELLDKPDNCCVNDGINYEVFEAFSFSNKKPIPLDWNERLSVILPI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggagaaattattgtacactacttatggcttttcttcctttcgtcctgggcag
aaggaagtgattgaaaagatagtagctggtgaagatgttattgcattgttgccaaccgga
atgggaaagtcaatttgttatcaattgccggcaaaaattttgccagatagtatattaata
gtttctccattgttgtcgttgatgcaagatcaagtagctcaattaaaaaaaatgggtgaa
aaatcagtcgttgcaataaactcttttttaaaaccagaagacaaagagagaattatgaaa
aagcttggttcttataaatttatttttatctcaccggaaatgctagttcagccgtttgtt
aagaaaaagctgcaagaaatacgggtttctttattagtagccgatgaagctcattgtatt
tctcaatggggctttgattttcggcctgattacctgcggatctctgaaattttacccgat
ttgaaattccctcaagttttagcgctgactgctactgctacagacaaagttactgaagaa
ataaaagagtatttggcactcataaaaccttttatttattgtcatccaatggatagaaaa
aatattgtttacgatataaagaaatttgaagacacccataaaaagcttgagtttttgaaa
gattttatcctgaaatttaaaggtcctggaattatttatgcgggtacaagaaaaaagtcc
caagagctgtctatgcttttaacggaacaagggatttcatctgctttttaccacggggga
atggaacatcaagatcgagtttttgttcaacagcagttccaaaacagagaggtagagtgg
atttgttctacaaatgcttttggtatgggagtgcatattgcaaatatacgacaagttatt
cattttcaagttccaacttcgattgaagggtacgtgcaggaagttggaagagctggtcga
gatggattgcctgctttggcgacattgctctatgctcaaggagatgaagctttgcttgaa
agcttagtgacggatgacttgccaacacgacatgaaatagaggctgtttttaatgatgga
ccttcagcgacttatttaatagatcgaggaatcgtaagagaaaccgcatttcgagttatt
gcttattggatgacaaaattaccgttagccggcgtaataagtcaaattgaagggctaaga
aaaggcaaaaagaaacaagcggcgaaaattcgagagctaatctcgagcgataattgtata
agaagttatataatcagcagttttgaccaagaacttctagacaaacctgacaattgttgc
gtgaatgatgggattaattatgaagttttcgaagcattttctttttctaataaaaagcca
atacctcttgattggaatgagcgtttaagtgtaatattacctatataa
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