Planococcus sp. PAMC 21323: Plano_1854
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Entry
Plano_1854 CDS
T03510
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pln
Planococcus sp. PAMC 21323
Pathway
pln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Plano_1854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_1854
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Plano_1854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
AAA_14
nSTAND_NTPase5
nSTAND3
AAA_29
KTSC
ATPase_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AIY05819
LinkDB
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Position
complement(1864280..1866799)
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AA seq
839 aa
AA seq
DB search
MAPTPMMQQYFQVKSEYLDAFLFFRLGDFYELFYDDAIKASQLLEITLTARGGSGDDRIP
MCGVPHHAAKNYIDQLILKGHKVAICEQVEDPKMTKGVVKREVVRLITPGTHTEGKSVDS
KSNVFLAAADELSDGFALSYVDISTGESTATYIMGTEKALLQELRSLSIRELVVSEQLFV
LLTEEEQDLVLSIETMEDAYKMDASLTVDCPEDLQTSCHRLMTYIARTQKQSLDHIQSFS
YKENTQLLSIDFHSKRNLELLQSIRGNETKGTLLWLLDETMTAMGSRKLKQWLHQPLANK
RMIEERQQMVEALIEQYFVRVELQGLLKEVYDLERLSGRIAFGSASGRDLAQLRSSLEKV
PMLIEELANSGDTALHEFGEKLDRCVEVCELLQAISENPPLSSKEGGVIRDGFHEKLDEF
RDASRNGKDWIAELEQKERKLTGIKSLKIGYNRIFGYYIEISKANMHLADLERYDRKQTL
ANAERYTTPELKEKEALILTAEEESLALEYNLFVAIRDEVKQYISRIQRLASSLSGLDVF
LSFANVAEKYRFVKPDFNDTNEISIIEGRHPVVEKMLNKQQYVPNDCVLAENQNMLLITG
PNMSGKSTYMRQVALTIVLAQIGSYVPAESANLPIVDQIFTRIGAADDLVSGQSTFMVEM
LESQYAITHATKNSLLLFDEIGRGTSTYDGMALAQSMIEYIHREIGANTLFSTHYHELTA
LENSLEKLHNVHVAAMEQSGKVVFLHKVKKGPADKSYGIHVAELANLPEPILARARELLK
TFEQDKKQQPKTIEQLSFFDEADTEKDEILQTIKDVQVSSMTPLQALQMINDLQEKLNQ
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacaccaatgatgcaacaatattttcaagtgaaatccgaatacttggatgct
tttttgtttttccgcttaggcgatttttatgaattgttttatgatgatgcgatcaaagcg
tcacaattactagaaatcacgttaacagcacgtggaggaagtggcgatgaccggattccg
atgtgcggcgtgcctcaccatgcggctaaaaactatattgatcaactaattttaaaaggt
cataaagtagccatttgtgaacaagtagaagatccaaaaatgactaaaggcgtggtgaaa
cgggaagttgtccgcttaataacacctggaacacatacagaaggaaaaagcgtcgattcc
aaatcaaatgtctttttagcagcagctgatgaattatcagatggctttgctttgtcatat
gtggatattagtacaggtgaatctacagcgacatacataatgggaactgaaaaagcattg
ttacaggagttgcgctctttgagcattcgtgaattagtagtttcagaacaattgtttgtc
ttgttgactgaagaagagcaagatctagtcctgtcgattgaaacaatggaagatgcttat
aaaatggatgcatctttgactgtggactgcccagaagatttacaaacaagttgtcaccga
ttgatgacgtatattgctcgtacccaaaaacaatcgttagatcatatccagtcattttca
tataaagaaaacactcaattattaagcattgattttcattccaaacgaaatttggaattg
ttgcaatctattcgtggcaatgaaacaaaaggaactttactgtggctgttagatgaaaca
atgacagcaatgggaagtcgcaaattaaaacaatggttgcatcagccgttagcgaataaa
cgcatgattgaagagcgccagcaaatggtcgaagcgttaatcgagcagtatttcgtgcgt
gtagagcttcaaggcttgttaaaagaagtttatgacctagaacgtctttccggacgtatc
gccttcggcagcgctagtgggagagatttagcgcagcttcgcagttctctcgagaaagta
ccgatgttaatcgaagagttggcgaattctggcgatacggctctacatgaatttggggag
aaattagatcgctgtgttgaagtgtgtgaattattgcaagcaattagtgaaaatccaccc
ctatcttcaaaagaaggcggtgtaattcgagatggtttccatgagaaactagatgaattc
cgagatgcttcgcgtaatggaaaagactggattgctgaacttgaacaaaaagaacgcaaa
ttaaccggtatcaaatcattgaaaattggctataaccgtatttttggttattatattgaa
atttcaaaagccaatatgcatttagcagatttagagcgctatgaccgaaaacaaacatta
gcaaatgcagaacgttacactactcctgaattaaaagaaaaagaagctttgatcttaacc
gctgaagaagaaagtttagcacttgaatataatttatttgtagcgattcgagatgaagta
aaacaatatatttcacgcattcaacgcctagcttcttcacttagtggattagatgtcttt
ttaagttttgccaatgtggcagaaaaatatcgttttgtaaaacctgattttaacgatacg
aacgaaatatccatcattgaaggtcgacatcccgtagtagaaaaaatgcttaacaaacaa
caatatgtaccaaatgactgtgtactagctgaaaatcaaaatatgctactcattacagga
ccaaatatgtcgggtaaaagtacgtatatgcgtcaagttgcattaacaatcgtattagct
caaattggtagttacgtacctgctgaatctgctaatttaccgattgtcgatcaaattttc
acgcgtataggagcggctgatgacttagtttctgggcaaagtacctttatggtcgaaatg
ctcgaatcgcaatatgccattacccatgcaacgaaaaacagcttattattgtttgatgaa
attggccgtggaacttcaacttatgacggcatggctttagcacaatcaatgattgaatat
attcatcgagagattggcgcaaatacattattttcaacacattatcatgagctgaccgca
ttagaaaattcactagagaaacttcacaatgtccacgtagcagcaatggagcagtcgggc
aaagtggtgtttctgcataaagtaaaaaaaggtccagctgataaaagttacggaattcac
gttgcagagttggccaatttacctgaaccaattcttgcgcgtgcacgagaattattgaaa
acctttgaacaagataaaaaacagcaacctaaaacaatagaacaattatcattttttgat
gaagcggatacagaaaaggacgaaattctacaaacgattaaagacgtacaagtgtcttcg
atgacaccgcttcaagccttgcaaatgatcaatgacttgcaagagaagttaaaccaataa
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