Planococcus sp. PAMC 21323: Plano_2126
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Entry
Plano_2126 CDS
T03510
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pln
Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_2126
Enzymes [BR:
pln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plano_2126
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Plano_2126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
SLFN-g3_helicase
ResIII
AAA_22
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
AIY06091
UniProt:
A0A0B4RDQ3
LinkDB
All DBs
Position
complement(2147998..2151606)
Genome browser
AA seq
1202 aa
AA seq
DB search
MIPKKPIDATWTDEQWMAIWAKGQDMLVSAAAGSGKTAVLINRMIEKVLAEDDPISVDEL
LVVTFTNASAAEMRHRMSNALEKAVSENPESSHLRKQLRLINKAQISTLHSFCLHVVKQY
AYLLEIDPGFRIAGDTEAALLRDDVLEAVLESAYEGEGADAVYRLADSFTSDRSDQAMEV
LLSKLYDYSRVHPNPHEWLQQVPSLYNVPADATIDNLPFIEDLKLTIRHALEEALQLTDQ
GLQLSHEPDGPAVLESTFRTDAEVIQAAIAALESSWESLYAFSKSFKWEKAASIRKDSCD
PALAEEAKARRNDVKKIVSGLFDAYFTRSPKRLLEEMREMAPLMKTLVELTQLFADQYKA
LKIDRALVDFSDLEHYALEILMEEGKPSAIAKEYQDRFKEVLVDEYQDTNLLQETILNLV
KSGDEQNGNLFMVGDVKQSIYRFRLAEPMLFLGKYSRFTHEASNTGLRIDLNANFRSRKE
ILDGTNYIFSQIMGERVGEIDYDEAAALKAKAPYPDQQTPVSLTLIHEPETEEETEDEDL
AKSQWEARFIAKKIKELIDDQIMVNDPWTQQERPLEYQDIVVIMRSMTWSGDFVDEFKMA
GIPLYAELTGGYFEALEVMIMLNTLRVIDNPYQDIPLASVLRAPFIGLKENELAEIRLAA
PQASFYEAVKTFMRAGTGIDPAAAEKLRRFILQLEGWRNLARRGSLAELIWQVYLDTNYY
EMVGAMTNGKQRKANLRALHDRALEYEKTSFRGLFRFLRFIDRMRERGDDLGTAKSLSEK
ENVVRLMTVHKSKGLEFPVVFFAGTGRNFNEMDFKKSYLFDQDYGLAVKAVNPDTRIEYT
SLPFLAVREMKQLQMKAEEMRVLYVAMTRAKERLYLTASVKDVEKLIEKWKVSTNDVRLP
DFMRSRAKGYLDWIGPAIARHPDAAEQLNVTGQFLEHSSHFHIDIIESQSLLPAVVSIEE
LLQDDLLSEDYQQQVNDRFNYQYPHQLAVEKRSKQSVTEMKRLQMLQRLDEPESFIQTTK
PERKMLSNRPNFMMDKRLSGADIGTAVHAIMQHIPLDRSLDSTEIKEFIDTLVGMEILSL
DEGKAVKVEEIERFYASETAARLRSAKNIKKEVPFTYAKKDADGDYQIIQGIVDCLFEEQ
DGWVLLDYKTDRVTHVHDVSEEMAERYSVQLTVYQEAVESILKISVKERLLYLFAANQEV
NI
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgataccgaaaaaaccgattgatgctacttggaccgatgaacaatggatggcaatatgg
gcaaagggacaagatatgttggtgtcagctgcggcaggatcggggaaaacagctgttctg
atcaaccgcatgattgaaaaagttttggctgaagatgatccaatatcagtggatgaactt
ttagttgtgacatttacgaatgcttcagctgctgaaatgcggcaccggatgtcgaatgca
ttggaaaaagctgtttcagaaaacccagaatctagtcatttacgcaaacaattacggtta
atcaataaagcacaaatttctacacttcattcgttttgtttacacgttgtgaaacaatat
gcatatttacttgaaatcgatccaggctttcgaattgcgggagatacagaagctgctctt
ttacgagatgatgtattagaagcagtgctagaatctgcatatgaaggtgaaggagcggat
gctgtttaccgattagccgatagtttcacgtcagatcgtagtgatcaggcgatggaagtc
ttgttaagtaaattatatgattattcccgtgtgcacccgaatccacatgagtggttgcaa
caagtacctagcttatataatgtgccggcggatgcgacgattgataatttgccgtttatt
gaagatttaaagttgacgatacgtcatgcattggaagaagcgttgcaattaactgatcaa
ggacttcaattgtcacatgagccagatggacccgctgtattagaaagcacttttagaacg
gatgctgaagtgatccaagcagcaattgcagcattagaaagttcgtgggaaagtttgtat
gctttttcaaaatcgtttaaatgggaaaaagccgcgagtattcgcaaagattcctgtgat
ccagctttagctgaagaagcaaaagctcgtcgtaatgatgtgaaaaaaattgtcagcgga
ttgtttgatgcttattttacacgctctccaaagcgcttattagaagaaatgcgagaaatg
gcaccgttgatgaaaactttagttgaattgacacagctattcgctgatcaatacaaagcc
ttgaaaattgatcgagcattggttgatttctccgacttagagcattatgcattggagatt
ttaatggaagaaggcaagccttcagctatcgccaaagaataccaagaccgctttaaagaa
gtgttagtggatgaatatcaagacactaatcttctacaagaaacaattcttaacttagta
aaatcaggcgatgaacaaaatggcaatctattcatggtaggtgatgtgaagcaatcgatt
taccgttttcgcctggcagaaccgatgttatttttagggaaatattctcgatttacacat
gaagctagcaacacaggattgcgcattgatttaaatgcaaatttcagaagccgaaaagaa
attttagatggcaccaattatatattctcacaaattatgggagaacgcgttggtgaaatc
gattacgatgaagccgctgcgctaaaagccaaagcgccatatccggatcaacaaactcct
gttagcttaactttaatacacgaaccagaaactgaagaagagacagaagacgaggacttg
gcaaagtctcaatgggaagcgcggtttatcgctaaaaaaatcaaggaattgatagacgat
caaataatggtcaatgatccttggacacagcaggaacggccgctagaataccaagacatc
gttgttataatgcgctcgatgacatggtcaggtgatttcgtagatgagttcaaaatggct
ggcattccattgtatgctgaattgacaggcggctattttgaagcacttgaagtgatgatc
atgttgaacaccttacgtgttatcgacaacccttaccaagacattccactggcctctgtt
ttacgtgccccgtttattgggttgaaagaaaatgaattggctgaaattcgcttagcggca
cctcaagcgtctttttatgaagctgttaaaacatttatgcgagcaggtacaggaatcgat
ccggctgcagctgaaaaactacgtcgttttatccttcaattagaaggatggcggaatctg
gcacgccgaggttccttagcggaattgatctggcaagtttatttggatacaaactattat
gaaatggttggagccatgaccaatggcaagcaacgaaaagcgaatttgcgagctttgcat
gaccgcgcgctagagtacgaaaaaacatctttccgtggattgttccgtttcctacgtttt
atcgatcgaatgagagaacgtggagatgacttaggaacagcaaaatcactcagtgaaaaa
gaaaatgttgttcgtttaatgactgtgcataagtcaaaaggactcgagtttccagtagta
ttttttgcgggaactggacgtaattttaatgaaatggattttaaaaaatcttatttgttt
gaccaagattacggattggcagttaaagcggtaaatcctgacacccgaattgaatacacc
tcattgccatttctagcagttagggaaatgaaacaattgcagatgaaagccgaagaaatg
cgtgttttatacgtagcgatgactcgagcaaaagaaaggctgtatttgactgcttcagtt
aaggacgttgaaaaacttatcgagaaatggaaagtgtctacaaatgatgttcgtttgcca
gactttatgagatctcgtgctaaagggtatttggattggattggcccagctatagccaga
catccggatgctgcagaacaattaaatgtcacaggacaatttcttgaacattcttctcat
tttcacattgatattatcgaatctcagtcattactaccagcagtcgtaagcatagaagaa
ttgttgcaagacgatttgttatcggaggattaccaacaacaagtcaatgatcgttttaat
tatcagtatccgcatcaactggctgttgaaaaacgttcaaaacaatccgtaacagaaatg
aagcgattgcaaatgctgcaacgtctcgacgaaccagaatcctttattcaaacaacgaaa
ccagaacggaaaatgttatcaaacagaccaaatttcatgatggacaaacgattatctgga
gctgatattggaacagcggtccatgcgattatgcagcatataccgttagatcgttcatta
gacagtaccgaaataaaagaatttatcgatactttagtggggatggaaattttatcactg
gatgaaggaaaggcggtaaaagtagaagaaatcgagcgtttttatgcgagtgaaactgcg
gcacgtcttagaagtgcaaaaaacataaaaaaagaagtgccttttacttatgcaaaaaaa
gatgcagatggggactaccaaattattcaagggattgtcgattgtttgtttgaagaacaa
gacggctgggtgttactagactataaaacggatcgtgtgactcacgttcatgatgtgtca
gaagaaatggctgaacgatatagcgttcagttaactgtttatcaagaagcggttgaatcg
attctgaaaatatcggttaaagaacgcttgctgtacttgtttgcagcaaatcaagaagtg
aatatttag
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integrated database retrieval system
