Planococcus sp. PAMC 21323: Plano_2421
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Entry
Plano_2421 CDS
T03510
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pln
Planococcus sp. PAMC 21323
Pathway
pln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Plano_2421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pln03021
]
Plano_2421
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_2421
Transcription machinery [BR:
pln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Plano_2421
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Plano_2421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
ColG_sub
BUD22
Motif
Other DBs
NCBI-ProteinID:
AIY06386
LinkDB
All DBs
Position
complement(2490524..2491084)
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AA seq
186 aa
AA seq
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MKIRELSKEELIEESFVDLTYAMLEETHETKTYAELVTEIEKLLNLSKEDMKDRLVQFYT
DLNIDGRFLILGENRWGLREWYPVEQIEEESAPTVKARKKKAKVADDEGFDDLDELSLED
ELEFEDFGEDDEEDEEDEVVKSPIEVLDFDADDDKEEDDVLVEDMDGNIIDDEDDDEDDD
EEDDLK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgtgaattatctaaagaagaactaatagaagagtcgtttgttgacttgaca
tatgcaatgttggaagagacacatgaaacaaaaacttatgcagaacttgttacagaaatt
gagaaattattgaacttgtcgaaagaagatatgaaagatcgtctagtgcaattctatacg
gatcttaatattgatggacgctttttaatcttgggcgaaaaccgttggggtctacgtgag
tggtacccggttgagcaaatcgaagaagaatcagcaccgactgttaaagcgcgtaaaaag
aaagcaaaagttgctgacgatgaaggctttgatgatttagatgagctatcactagaagat
gagttggaatttgaagatttcggtgaagatgatgaggaagacgaggaagatgaagtcgtt
aaatcgcctatcgaagtgcttgatttcgatgcggatgacgacaaagaagaagacgacgta
ctagttgaagacatggatggcaatatcatcgatgacgaagatgatgacgaagacgacgac
gaagaagatgacttgaagtaa
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