Planococcus sp. PAMC 21323: Plano_2535
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Entry
Plano_2535 CDS
T03510
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pln
Planococcus sp. PAMC 21323
Pathway
pln03420
Nucleotide excision repair
pln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Plano_2535
03430 Mismatch repair
Plano_2535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_2535
Enzymes [BR:
pln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plano_2535
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Plano_2535
MMR (mismatch excision repair)
Other MMR factors
Plano_2535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIY06500
UniProt:
A0A0B4REX7
LinkDB
All DBs
Position
complement(2608176..2610302)
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AA seq
708 aa
AA seq
DB search
MSQFFERKKQELGVQLNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRIGYLIEEKGVFP
SRIKAITFSKASANDMLERYKRFFPTLQPIDFSTIHSLAFQITRDYFSGSRYLMIEGNET
NGLHKKKLLREMYRTENDEPITDDQLEELISFISFVKNKMLPRKQWAKLKEPFPGAIEIL
KTYEAFKENYDVRLVDFDDMLSLAYEALEKDKSLLAKYQGRWDYVMTDESQDTSQIQHAI
VEKLVARHQNLCVVADDDQSIYTWRAAEPTYLLKFRTVYPNAYIMKMERNYRSSQNIVHT
ANAFIKTNKKRHDKNMFTKQGEGDPIVLKRLSSEDAQFKYVLKELKELTDYGDVAILYRN
NSSSTLLMSELERLGIPFYMKDSDNRFFSHWIVEDMLNFMRFSLKPERIDIYSKVASKTN
AYWSSSQLKMLSRMKPTGKHAFDDINLTITLKDYQLKILAEQKKWFEALNNMKPLKVIRT
IRGEMGYDQMLASRAEKFGMKMTYLAQILTTLEQIAEPLDSMTAFAKRLKQLEQVTQQAK
KEKTDDMLTLSTFHSSKGLEFERVYMIDLVEGVIPTEDDAETPDLLEEARRLFYVGMTRA
KTHLELVSHGNESRFVGEVRKLIVPEKRLATTQSDKAKTPIKVKVPDNPNAIHTEEVLRE
GVRVRHRVFGAGKIVERDKDRISIQFAKERKDLMIDICISYKLLETIE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattctttgaacgaaaaaaacaggaactgggagttcaattaaataaaatacag
cgaaaagcagtcgaacgaacagaaggtccattgttgttactagcgtgtcctggatctggg
aaaaccaccacaatgatcatgcgaatcgggtatttaatagaggaaaaaggagttttccca
tcacggatcaaagcgattacgtttagtaaagcctcagctaacgatatgcttgagcgttac
aaacgttttttcccaacattacaacctattgatttttctacgattcatagtttagctttt
caaatcactcgagattatttttcaggatcacgttatctcatgatcgaaggcaatgaaaca
aatggtcttcataaaaagaaattgcttcgagaaatgtaccggacagaaaacgatgaacca
attactgacgatcaattagaagaattgatttcgtttattagtttcgtaaagaataaaatg
ttgccaagaaagcaatgggctaaactaaaagaaccttttcctggagcgattgaaatctta
aaaacctatgaagctttcaaagaaaactatgacgtaaggttagtagattttgatgacatg
ctctcactcgcttatgaggctttagaaaaagataaaagcttactagcaaagtatcaagga
cgctgggattatgtgatgacagacgaaagccaagatacttcgcagattcaacatgctatt
gtagagaaattagtagcacgccaccaaaacctgtgtgtcgtggcagatgacgatcaatcg
atttatacgtggagagccgctgaacctacgtatttactaaagtttagaaccgtttatcca
aacgcctatattatgaaaatggagcgtaattatcgttcctctcagaacatcgttcatact
gcgaatgcatttattaaaaccaataaaaagcgtcacgataaaaacatgttcaccaaacaa
ggcgaaggtgatccaattgtcttgaaacgattaagttcagaagatgcacaatttaaatac
gtgctaaaagaattgaaggaattgacggactatggagatgtagctattctgtatcgcaat
aattcatcttcaactttattaatgagcgagcttgagcgtttaggcattccgttttatatg
aaggattcggacaatcgctttttctcgcattggattgtggaagacatgttgaattttatg
cgttttagcttaaagccggaacgtattgatatttattcaaaagtagcttctaaaaccaat
gcgtattggtcaagcagtcaattgaaaatgctgagtcgaatgaagccaacaggtaagcat
gcctttgacgacatcaatttgacgattacattaaaagactatcaacttaaaattttggct
gagcaaaaaaaatggtttgaagcattaaataatatgaaacctttaaaagtgattcgaacg
attcgtggggaaatgggttacgaccaaatgcttgccagtcgtgccgagaaatttgggatg
aaaatgacgtacttggcacaaatccttaccactttagaacaaatagcagaaccgctagac
tcaatgacggcatttgctaaacgtctcaagcaattagaacaagtaacgcaacaagctaaa
aaagaaaaaaccgacgatatgcttaccttatctactttccacagctcaaaaggcttggaa
tttgaacgggtttatatgattgatttggtagaaggtgttattccaacagaagacgatgcg
gaaacgcctgatttattggaagaagcacgtcgattgttttatgtaggcatgacaagagca
aaaacgcatttagaactggttagtcatggcaacgaatcacgttttgttggagaagtgcgt
aaactcattgttcctgaaaaaagactagccacaactcaaagtgataaagctaaaactcct
attaaagttaaagttccggataatccaaatgcgatccacacggaagaggttttgcgtgaa
ggtgttcgggttcgtcaccgcgtttttggagcaggaaaaattgtcgaacgagacaaagat
cggatttctattcaatttgcaaaagaaagaaaagacttaatgattgatatttgcataagc
tataaattattagagacgatcgagtag
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