Candidatus Portiera aleyrodidarum BT-QVLC: C548_018
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Entry
C548_018 CDS
T02307
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
plo
Candidatus Portiera aleyrodidarum BT-QVLC
Brite
KEGG Orthology (KO) [BR:
plo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plo03032
]
C548_018
03400 DNA repair and recombination proteins [BR:
plo03400
]
C548_018
Enzymes [BR:
plo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C548_018
DNA replication proteins [BR:
plo03032
]
Prokaryotic type
DNA Topoisomerases
C548_018
DNA repair and recombination proteins [BR:
plo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C548_018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFT80384
LinkDB
All DBs
Position
22796..25018
Genome browser
AA seq
740 aa
AA seq
DB search
MYDSSKIKILKGLDPVKKRPGMYIGNTDDGTGLHHMLFELIDNSIDEYLAGFCTTIRIQI
IKYKILTIEDNGRGIPIDTHSFGISAAEIIMTILHAGGKFDNDSYNFSGGLHGVGLSVVN
ALSEFMKLYIYRKNKSYKQLYLNGIPTTPLKTIGRTKKNGTKISFKPSTKIFINSSLNYN
IIYKRLQEMSFLNKKLKIVLINNEKQIVLYNEGGIKTFVAKLNNHKTNICPIFYLHSKKT
NMLIEVAVQWNNSFTELVKCYTNNIPQTDGGTHLFGFRTALTKVIKTYIKKENIKNNYSI
NSDDIKEGITAIIAIKMQNPKFSSQTKNKLISSEIKIAVENELNKTFYLYLLEHPKESKN
LIKKFINSAKIRESSRKARNVARKRLALDVAKLPGKLSDCQEKNPKKSELYIVEGDSAGG
SAKQGRDRRIQAVLALKGKIINVEKSGFEKIFVSNEIVTLITALGCGIGQKEFDIKNLRY
HTIIIMTDADVDGSHIRTLLLAFFFRYMPKLIENGYVYIAQPPLFKIKHIKKDIYINNEK
DLHKHTLKICLKEKQLLSNKKYISIKKLLLKYISVYNISNKRKKSDLKLEKNYLNDAYYL
NKFYSFYFYLNKLVLSSNIYYVLISFKKQLNKLNNFNDKINLFFNKKIFKSFYKLYDLIQ
LIFYKLFYKSFYIQRYKGLGEMNPNQLWETSMNPFKRILFKMIIKDVCKANLLFNILMGE
SVKPRRHFIQNNALLANIDL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattcatccaagattaagatcttaaaaggtttagatcctgtaaaaaaaagacca
ggaatgtatataggcaatacagatgatggtactggtttgcaccacatgttatttgaactt
attgataattctattgatgaatatttagcaggtttctgtacaactattagaatacaaatt
ataaagtataagatactaacaattgaagataatggaagaggaatacctatagatactcac
tcattcggcatatcagctgcagagataattatgactatattacatgcaggaggaaaattt
gataatgattcttataacttttctggcggtttacatggtgtaggtttatcggtagtaaat
gctttatctgaatttatgaaattatatatttatagaaaaaataaatcttataaacaacta
tatttaaatggaataccaacaacgcctttaaaaacaattggaagaacaaaaaaaaacggt
accaaaataagttttaaaccttcaacaaaaatttttataaatagcagtttaaattacaat
ataatctataaaagattacaagaaatgtcttttttaaataagaaattaaaaatcgtttta
ataaataacgaaaaacaaatagtattgtataatgaaggtggaattaagacgtttgttgca
aaacttaataatcataaaactaatatatgcccaattttttatttacattcaaaaaaaaca
aatatgcttatagaagtagcagttcaatggaataattcatttacagaattagttaaatgt
tacacaaataatataccacaaactgacggtggaactcatttgtttggttttcgcacagct
ttaacaaaagttattaaaacgtatattaaaaaggaaaacataaagaataactattctata
aatagtgatgatataaaggaaggaataactgcaattatagctattaaaatgcaaaaccca
aaattttcttcacaaacaaaaaataaattaatatcatcagaaataaaaatagcggtagaa
aacgaattaaacaaaacattttatctttatttattagagcatcctaaagagtcaaaaaac
cttataaagaaatttattaattccgcaaaaatacgagaatcttctcgtaaagcaagaaat
gttgctagaaaaagactagctttagatgttgctaaattgccgggtaaattatctgattgt
caagaaaaaaatccaaaaaaatcggaattatatatcgtagagggcgattctgctggtgga
tcagctaagcaaggaagagacagacgtatacaagcagttttagctttaaaaggaaaaata
attaatgtagaaaaatcagggtttgaaaaaatatttgtatcaaatgaaatagtcacgtta
ataacggcattaggttgtggaataggacaaaaagaatttgatataaaaaatttacgttat
catacaattataattatgacagatgcagatgtagatggttcacatataagaacattatta
ttagcatttttttttagatatatgcctaaactaattgaaaatggttatgtatatattgca
caaccacctttgtttaaaattaaacatataaaaaaagacatatatataaacaatgaaaaa
gatctacataaacatacacttaaaatatgcttaaaagaaaaacaacttctaagcaataaa
aaatatataagtataaagaaattactgttgaagtatataagtgtttataatatttcaaac
aaaagaaaaaaaagtgatttaaaattagaaaaaaattatttaaatgatgcttattatcta
aataagttttattctttctatttttatttaaataaattggtattatcatctaatatctat
tacgtgttaataagctttaaaaaacaactaaacaaattaaataattttaatgataagatt
aatttattctttaataaaaagatatttaaaagtttttataaactctatgatttaatacaa
cttatattttacaaattgttctataaaagtttttatatacagagatataaagggttagga
gaaatgaatcctaatcaattatgggaaacatcaatgaacccctttaaacgaatattattc
aaaatgataattaaagacgtttgtaaagcaaatttactttttaatatattaatgggtgag
agcgttaaacctagaagacactttatccaaaataatgcgttacttgctaatatagatctt
tag
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