Candidatus Portiera aleyrodidarum BT-QVLC: C548_093
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Entry
C548_093 CDS
T02307
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plo
Candidatus Portiera aleyrodidarum BT-QVLC
Pathway
plo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C548_093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plo03021
]
C548_093
03400 DNA repair and recombination proteins [BR:
plo03400
]
C548_093
Enzymes [BR:
plo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C548_093
Transcription machinery [BR:
plo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C548_093
DNA repair and recombination proteins [BR:
plo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C548_093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HEPN-like_int
Motif
Other DBs
NCBI-ProteinID:
AFT80459
LinkDB
All DBs
Position
104049..105038
Genome browser
AA seq
329 aa
AA seq
DB search
MSSVNEFVRPSKINVEAISNNHAIISLEPLERGFGHTLGNALRRILLSYMPGCAVVEAEI
KGVQHEYSVIDGIKEDVIEIILNIKEIAIKLYGIDEIELELKKIGSGVVKAGDIKARQDV
EIINPDHVIAHLNDHGELNMKLRFVRGRGYEPAYLRNKSDKNFGRIQIDAKFSPVKRVAY
FVESARVEQKTDFDKLIIELETNGTLDPEEAIRTSAKILRNQLDFFVDLSCENKKHVENE
VEHDRRTDTKIDKALLLPVEDLELTVRSANCLKAENIFYIGDLVKRTEGELLKTPNLGKK
SLNEIKKVLKVRGLALGMHIDLWPPGKKN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagttaacgagtttgtacgtccaagtaaaataaatgtagaagcgattagtaat
aatcatgcaattataagtttagaacctttagaacgtggatttggtcatactttaggaaat
gcattgcgtcgtattttattatcttatatgcctgggtgtgcagttgttgaagcggaaata
aagggagtacagcatgaatatagcgtaatagacggtattaaagaagatgtaatagaaata
attcttaatattaaagaaattgcaattaaactgtatggtattgatgaaatagagctagaa
ttaaagaaaataggttcaggagtagtaaaagcaggagatataaaggcaaggcaggatgta
gaaataataaatccagatcatgtaattgcacatttaaatgatcatggagaactaaatatg
aaattgcgttttgttagaggaagagggtatgaaccagcttatttacgtaataaatcagat
aaaaattttggtcgcatacagatagacgcaaagtttagtccagtgaagagagtcgcatat
tttgtagaatcagcaagagtagaacaaaaaacggattttgataagttaataatagagtta
gaaactaatggaacattagacccagaagaagcaatacgaacttcagcaaaaattttaaga
aatcaattagatttttttgttgatttatcatgtgaaaacaaaaaacatgtagaaaatgag
gtagaacatgaccggagaacagatacaaaaatagataaagctttacttttaccagttgaa
gatttggaattaacagttagaagtgcaaattgtcttaaggctgaaaatatattttatatt
ggcgatttagttaaaagaacagaaggtgaattattaaagacacctaatcttggtaaaaaa
tcattaaatgaaattaaaaaggttttaaaggttagaggtttagcattgggtatgcatatt
gatctctggccacctggaaaaaaaaactaa
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