Polystyrenella longa: Pla110_02140
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Entry
Pla110_02140 CDS
T06945
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
plon
Polystyrenella longa
Pathway
plon02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plon00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pla110_02140 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plon03021
]
Pla110_02140 (sigA_1)
Transcription machinery [BR:
plon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pla110_02140 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
QDU78510
UniProt:
A0A518CH09
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Position
293372..295129
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AA seq
585 aa
AA seq
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MHRLNDDLKALISKANSEGQLTFQAVDDFLPDEGGDPALIDHLVMALEENALEVVDDPQA
YSWKADEDADQGKKSTPEIRVEEEEVTPEVASAMANALAAAETSALSSRDPIRMYLSQMG
NIPLLSRRREIFLAKQIELTRKRFRRTLLESDFAIAQTVETFEKVNIGELPFERTLRTSE
TENVQKEQILGRMSHNLSTLRNLMNQNREDFHSLEDITSKTALKEIRGKMIRRRRKMATL
CEELSLRTQRLQPIMKRLHQIADRMMELDRQIKRYSKSPASHTDVAVLRRELDEFVEMTL
ETPAEFKGRSDEIKNRFDGWTEAKQQLSGGNLRLVVSIAKKYRNRGLSFLDLIQEGNAGL
MRGVEKYEYRRGYKFSTYATWWIRQAITRAVADHARTIRIPVHMFQSISTLKAKSEQIRQ
ETGREPTMEELAEAVDLTVEETERIMKTWKHPISLDTPVGESEDSSFGDFLEDGNEGNPA
DSAMRQMLRDKIEHVLKSLTYREREIIRLRYGLGDGYSYTLEETGRIFKVTRERIRQIES
KALKKLQHHTRSDHLKGFVDDMLSVEATGEEGTEAAPAQEPALAI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcgtttaaacgatgacttgaaagcactcatcagtaaagcaaattccgaaggtcaa
ctaacctttcaggcagtagatgattttctgcctgacgaggggggcgatcctgcactgatc
gatcatctggtgatggcgctggaagaaaatgcgctggaagtggttgatgatcctcaggct
tactcttggaaggctgacgaagatgctgatcagggtaaaaagtcgaccccagaaatccgt
gttgaagaagaggaagtaactccagaagttgcctccgcgatggccaatgcgctggccgct
gccgaaacctcggcactttcttcacgcgatcctattcggatgtatctgagccagatggga
aatatccctctgctttcccgccgacgggaaatctttctggcgaaacagattgaactgaca
cggaaacggttccgccgcacattgctggaatccgatttcgcgattgctcaaacggtcgaa
acattcgaaaaagtgaacatcggcgaattgccgttcgaaagaacgttgcgtacctctgaa
accgagaatgtacaaaaagaacaaattctcggtcggatgtctcacaacctttcgactctg
cgtaatctgatgaaccagaaccgggaggacttccattcgctggaagatattacttccaag
acggctctaaaagagatccgcggaaaaatgattcgtagacgccgaaagatggcgaccctc
tgcgaagaactcagtttgcgaacccaacgcttacaacccatcatgaaacggttgcaccag
attgcagatcgaatgatggaactggatcgacagatcaagcgttacagcaaaagtccggcg
tcccataccgatgttgcggttcttcggcgagagctggacgaatttgtcgagatgaccctt
gaaactcccgccgagttcaaaggccgatccgacgaaatcaaaaatcgctttgacggttgg
acagaagccaaacagcaactgtctggcggtaacctgcggttggtggtttcgattgccaaa
aagtaccgtaatcgtggtctcagctttctcgacctcattcaggaagggaatgccggcctg
atgcgaggtgttgagaagtatgaataccgacgtgggtacaaattctcgacttacgccacc
tggtggattcgtcaagctattacgcgtgccgttgccgaccatgcccggactattcgtatt
ccagttcacatgttccagagcatctcgacgctgaaagccaagagcgaacagattcgtcag
gaaaccggtcgcgaaccgacgatggaagaactggccgaagcggtcgatcttactgtcgaa
gagaccgaacggatcatgaaaacctggaagcacccgatcagtctcgatacgcctgtaggc
gaaagcgaagacagcagcttcggtgactttctggaagatggtaacgaagggaacccggcc
gattcggcgatgcggcaaatgctgcgggacaaaatcgaacatgttctcaaaagcctgacc
taccgtgagcgggaaattatccgtctgcgatacggcctgggtgatggttacagttacacc
ttggaagaaacagggcgtatcttcaaagtgacccgggaacgtattcgtcagatcgaatcg
aaagccctcaagaagctacaacatcacactcgtagcgatcatttgaaaggctttgtcgac
gacatgctttctgtggaagcgaccggtgaagaaggaaccgaggcagctcccgcacaggag
ccggccctggccatttaa
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