Polystyrenella longa: Pla110_09940
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Entry
Pla110_09940 CDS
T06945
Symbol
smc_3
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
plon
Polystyrenella longa
Brite
KEGG Orthology (KO) [BR:
plon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plon03036
]
Pla110_09940 (smc_3)
Chromosome and associated proteins [BR:
plon03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Pla110_09940 (smc_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_29
AAA_15
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDU79288
UniProt:
A0A518CJ86
LinkDB
All DBs
Position
complement(1252641..1256510)
Genome browser
AA seq
1289 aa
AA seq
DB search
MLKSLELFGFKSFADRTRFDFSTGVTGVVGPNGSGKSNVVDSIKWLLGDQSAKSLRGKEM
SDVIFNGSSSRKPAQVSEALLTFDNKSRFLPIDLDEVQIGRRLWRSGDSEYLINQQPVRL
KDVRNLISGTGTGGSAYAIIEQGRVGQILQANVSSRRAIVEEAAGISRYKSRKVEAQRKL
EHVDQNLKRLTDIVDEVESQLNSTRDQAVKASRYRDLSLELKQLWLGLAADDYRYIHSQG
SQIKERLQSAQKSLDEKNSHQSDLESQLAESEGELNEIDERLTAIETERSQNREQVASLE
ATQRHQTSRIRELENELTRLQHQRSTLMLRAKEGHQEHTYTRDQLNRFRTDFESQQNRID
EGSSHIQELSVRVSSERLKLEDARKELLDQTQQMASAAHRVESLQDSVDSVRLQIEETHR
DQKEIEKQLAHFHTERNQQQEVFDAHEQQLNATREELQFHEQQNQELSQRHRDLVRRIST
LREDLSGIRARKTVLEDLEIREEGIGLGVREILKRANSSEADSPWKQIRGSVVDLLEVDL
LHAAELEVALGMRAQLIVVDDAAPIMEHIYLNQVQLSERVGFFSLAQTAGRTRELEDFSS
IDGVVQRADKLVTACPIPDLPELLLAETWLVETLDVAFALQKQARHPSRFVTLQGELLEA
DGTLYLGSLRTETSLITRKSELRQLRHDIQLQEKKIDDQTALADQLHVEHREALQHKQDK
ELQLKEQTERFNAVRMTLEQKQKQVDELTGKQTAQNTQSQKLRIENEQLQKQLESAFEEH
SQAEKKQASLQSLIEEKEHALTNSEHRLQLLKQSATDEQLQLAKQEERLSSLQTAFDRLE
HELGQRLERREEAEERYKEFRSKLSELRLQLLKSNSELADQALSGETLESRALTQIRLKR
KCRDSRAELVDRESKMRQVRRELSDRVHKEEIRLQEFQLQLKTLRERIEEEYQLTLEDVV
SSGASAVQLYWQEENLEESTSEEEQSSLEVDLDETSSADDEEIEDTTLEDQDEELDKSLI
EDSTEEQTAEQTNAIDSSSKDSGLNDEEFSSLYEQVREEIESRVSKLRQRLKTMGSINTE
SLDQLDSLETRFAHLSMQLEDLTQAKNALEDIIRRINTESKRMFIETYDSIRVNFKDLFR
KLFGGGNGDIILEDPDDPLECGIEIVARPPGKELRSISLLSGGEKTMTAVALLMAIFRSK
PSPFCILDEVDAALDEANIGRFINVVKEFQSETQFIMITHRKPSMTVTDRLFGVTMEESG
VSKRLTVQFDDIKENGEFDVNADDNRKAA
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagtctctggaactatttggtttcaagagctttgcggatcggactcggtttgat
ttttcaacgggtgtgacgggtgtcgttggccccaacggaagtggcaagagcaacgtagtc
gactcgatcaagtggctcttgggcgaccagagtgcgaaaagccttcgtggaaaggagatg
tcggatgtcatcttcaacggttccagctcacgcaaaccggcacaggtttccgaagcactc
ttgacgttcgataacaagtctcgctttttgccaatcgatctcgatgaagttcagatcggt
cgccgactctggcgcagtggcgattccgaatacctcatcaatcagcagccggttcgcctg
aaagatgtccgcaatctgatcagcggaacaggaacgggcggctctgcttatgccatcatc
gaacagggccgcgtcggccagatcctgcaagcgaatgtctccagccgtcgagccattgtc
gaagaagcggccggtatcagccggtataagtctcgcaaagtcgaagctcagcggaaactg
gagcatgtcgaccagaatctgaaacggttaaccgacattgtcgacgaagttgaatctcaa
ctgaattcaacacgcgatcaggcagtgaaggcttcccgctatcgggacctttcactcgag
ctgaagcagctctggctcggacttgctgcggacgattatcgctacatccacagccagggc
agccagatcaaagagcgactgcagtctgctcaaaaaagtctggacgagaaaaacagtcat
cagtccgatctggaaagccagcttgctgaatcggaaggggaactgaatgaaatcgacgaa
cgcctgacggccattgagaccgaacgatctcagaaccgggaacaggttgcctcgctcgaa
gcgacccaacgccaccagacgtcgcgaattcgagaactcgaaaatgagttaacacgatta
caacatcagcgatcaaccttgatgcttcgcgcaaaggaaggtcaccaggaacacacttat
acccgcgaccaactcaatcgattccgaaccgatttcgaatcgcaacagaatcgaattgat
gaaggaagctcccacattcaggagctatccgttcgtgtttcttcggaacgattgaagctc
gaagacgctcgaaaagagcttctggaccagactcagcagatggccagcgccgcgcatcgt
gtggaaagtctgcaggattcggtcgacagtgttcgtctgcagatagaagaaacccatcgc
gatcagaaagaaattgaaaaacagctcgcccattttcatacggaacgaaatcaacaacag
gaagtcttcgatgcgcatgaacaacagctgaatgccacccgcgaggaacttcagtttcac
gaacaacagaatcaggaactgtctcaacgtcaccgggatcttgttcgtcgaatttccaca
ctgcgggaagatttaagcggaatccgtgctcgcaaaacagtactggaagacctggagata
cgtgaagaaggaatcggattgggggttcgcgagattctcaaacgggcgaacagttccgaa
gccgattctccatggaaacagattcgaggttccgtcgttgacttgctcgaagttgatttg
ctccacgccgccgagttggaagtggcactgggaatgcgggcgcaattgatcgtcgtcgac
gatgctgcaccaatcatggagcatatctatctgaatcaggttcagttatcggaacgagtc
ggattcttttctctcgcccagactgccggccgaacaagagaactggaagacttttcgtca
atcgacggagtggttcagcgcgccgacaagcttgttaccgcctgcccgattcccgattta
ccagaactgctgctggcggaaacttggttggtcgaaacactcgacgttgctttcgcattg
caaaagcaggcacgccacccctctcgattcgtcacgcttcaaggcgaactgctcgaagca
gatggtaccctttacctgggaagtctgcgtacggaaacctcgctgatcactcgaaagtcc
gagttgcgacaactgcgacacgacattcaacttcaagaaaagaagattgacgaccagacg
gccctggccgaccagcttcatgttgaacatcgcgaagcacttcaacacaaacaggataaa
gaacttcagctgaaggaacagactgaacggttcaacgcggtccggatgaccttggagcag
aaacaaaaacaggttgacgaactgacgggcaaacagaccgcgcagaatactcagtcacag
aaacttcggattgagaacgagcaactgcaaaaacagttggaatccgctttcgaagaacat
tcacaggcagaaaagaaacaggccagcctgcaatcgctcatcgaagagaaagagcatgcg
ctgactaattcagaacatcggttgcaactgctcaaacaatccgcgacggatgaacaactt
caattggcaaaacaggaagaacgtttaagcagcctgcagacagcctttgatcgattagaa
catgaattaggccagcgtctggaacgacgtgaagaagccgaagaacgatacaaagagttc
cgcagcaaactgagcgaactccgtctccaacttctcaaatcgaattcggaactggcggac
caggctctatctggagaaacactggaatcgcgtgccctcacccagatacgtcttaaacga
aaatgccgagactcccgcgccgaattggtcgatcgggaaagcaaaatgcgccaggtccga
cgggaactgtccgaccgggtgcataaagaagaaatccgccttcaggaattccaactgcaa
ttgaaaacattgcgggaacgaattgaagaagaataccagctgacgttggaagatgtggtc
agctcgggagcatccgccgttcaactatactggcaggaagagaacctcgaagaatcgacc
agcgaagaagagcagtcctctttggaagttgaccttgatgaaacttcgtctgctgatgat
gaagagattgaggataccactttagaggaccaggacgaggaactcgacaagtcacttatt
gaggactcgacagaagaacagaccgcagaacaaaccaacgccatcgatagctcttcaaaa
gactctggcctcaatgatgaagagttcagctcgttgtatgagcaggtacgggaagagatt
gaatcacgggtcagtaagttacgtcaacgtttgaaaacaatggggagcattaacaccgag
agcctcgaccaactcgactctctggaaacccgcttcgcgcacctgagcatgcaactggaa
gacctgacgcaggcgaaaaacgcgctcgaagacatcatccgacggatcaacaccgagagc
aaaaggatgttcatcgagacctacgactcgatccgcgtgaacttcaaggacctcttccgc
aagctgttcggtggtggaaacggcgatatcatcctggaagatcccgatgacccgctggaa
tgtggcattgaaatcgtcgcccgcccaccgggtaaagagcttcgcagcatctctctctta
agtggtggggagaaaacgatgacggctgtcgccctgctgatggcgattttccgtagtaaa
ccgagtccgttctgtattctagacgaagtcgacgccgcgctggacgaggcgaacatcggc
cggtttatcaatgtcgtcaaagagttccagtcagaaacgcaattcatcatgatcactcac
cgaaaaccatcaatgacggtaactgaccgtctgtttggggtgaccatggaagaatcgggc
gtttctaaacgactgaccgtgcagttcgatgacatcaaagagaatggtgaattcgacgtc
aacgccgacgacaatcgcaaagcggcctga
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