Polystyrenella longa: Pla110_12430
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Entry
Pla110_12430 CDS
T06945
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
plon
Polystyrenella longa
Pathway
plon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pla110_12430 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plon03019
]
Pla110_12430 (rhlE)
Enzymes [BR:
plon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pla110_12430 (rhlE)
Messenger RNA biogenesis [BR:
plon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pla110_12430 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QDU79532
UniProt:
A0A518CJY0
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All DBs
Position
complement(1596639..1598063)
Genome browser
AA seq
474 aa
AA seq
DB search
MGPPLTESTKSFSDLKLRKAILKSLEQEGYDVPTPIQAESIPHIINGHDLIGCAQTGTGK
TAAFSLPILSFLDEDRRSAKPNCPRVLILSPTRELAIQIGESIQTYGRNMKFRHAVIYGG
VSQHRQTKALNRGVHLLVATPGRLLDLMNQGFIHLNELEIFVLDEADRMLDMGFLPDLKK
IIKTLPDERQSLFFSATMPQKVSQLANSLLVDPIRVEVSPNSSTVENIKQVAYMVPKNKK
RDLLLQLLEDSNFGSAIIFTRTKRGADLLATKLHQGKIKAEAIHGNKSQAARQRILNGFK
TGKTHILVATDLAARGIDVDGITHVINFDMPQEAEDYVHRIGRTGRAGATGIAVTFCEPG
QKRGLRDIERLTESQIEILTNTFQPLQGGANDQDTRTEDELRDPRPQQRRKFQRKEGPTS
SPSGERKFKGRPGRKKFNKSSSESSESSFGKPRTKKPFKGKPKRKPKPARRPGK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggacctcccttgaccgagtctaccaaatcattttctgatctgaaattacgtaaagcg
attctgaaatccctggaacaggaagggtacgacgtaccgactcctattcaggcggaatcg
atccctcatattattaacggccacgacctgattggttgcgcacaaacaggaaccggtaaa
acggccgccttttcgcttccgattttaagcttccttgatgaagatcgtcggtctgcaaaa
ccaaactgcccccgagttctgattctttcccctacccgggaactggccattcaaattggc
gagagcattcagacttatggtcgcaacatgaagttccgccacgcggtcatttatggcggc
gtgagccagcatcgtcagactaaggcactcaaccgaggagttcacctgttggtggcaaca
ccgggacgtttgctcgacctgatgaaccagggtttcattcacttgaatgaactggaaatc
ttcgtgctggacgaagcggaccgaatgctcgacatgggcttccttcccgacctcaagaag
atcatcaaaaccttgcccgatgaacggcagtcactcttcttctcggctacgatgccccag
aaagtttcgcagttggcgaatagcctgctggtcgatccgattcgtgtagaagtatctccg
aacagttcgaccgtcgagaatattaaacaggtcgcctacatggtgcctaaaaacaaaaaa
cgggatttattgctccagttgctggaagattccaactttggatcggccatcatcttcacc
cgaaccaaacggggggcggatctgctagcgacaaaattgcatcaaggcaaaatcaaagcg
gaagcaatccacggcaacaaatcacaggcagcccgtcaacggattttgaacggtttcaaa
actggcaagactcacattctggtggcaaccgacctggctgcccgcggtattgatgtcgat
ggcattacccacgtcatcaattttgatatgccacaggaagcagaagactatgtccatcgc
attggtcgtaccggccgggcgggagcgactggaatcgcagtcacgttctgcgaacccggg
caaaaacgaggtctccgcgacatcgaacggcttaccgagagtcagattgaaatactgacg
aatacgttccaacctcttcagggtggagctaatgatcaggatactcgaactgaagatgaa
cttcgggatccacgtcctcaacaacgacgtaagttccaacgaaaagaaggcccgacctct
tcgcccagtggagaacgtaaattcaagggacgaccgggacggaagaaattcaataagagt
agttccgaaagctcggaaagctctttcggaaaacctcgaaccaaaaagccgttcaaaggc
aaacccaaacggaaaccaaaaccagcccgacgccccggtaaataa
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