Polystyrenella longa: Pla110_20000
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Entry
Pla110_20000 CDS
T06945
Symbol
rapA_1
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
plon
Polystyrenella longa
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDU80275
UniProt:
A0A518CM24
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Position
complement(2607065..2610376)
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AA seq
1103 aa
AA seq
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MALSDILESQFRGDIRFRGASFLETERVAISRATADNIFGTVRDSPSSVEFQTQISRADN
GVKLFCSCSTHLDKPSCRHLWATILAAEQEGIIPGALRPGFFPPFNGTEVEFQLSNDDEW
DDEPDIGQLMSGLSTSKKETTVVDPPRKRTRPWETDLLKIREALLTRHETSRGPSKSREI
LYELDLESSRASGALMVQTSQRQRRADNTWGKEKPLKLKLSQLSDVENSLDRKILTYLLG
GTPEKAGAPSNQADTQFLAFRFAISYELCDLLLPMLAESERFRLLDAPVSNPICWQPDRI
WDFSIEMQTNDDGDWELLGELERDGKRMPLSQADLLIPGGLVLIGNKLSKLRDYDAFEWM
EIFQQEGKFIIPSDDEKDFVNLLYEIPEVPRLHIPSELKLEEVTGTPKFILRLTTPSGRR
WKNETLRGNVQFDYDDTIVEARHRNWAIVDRDAEVCLVRNREHEEKAFIQLQSAGFRRVL
MGANQKSDVEIPPAHLGTAVRKLMEDNWQVLADDKKVRQSGNLTFRVDTNIDWFELHADF
DFDGKLASFPELLSAIARGDNTIRLDDGSLGIIPEEWARQFGLLANLGVSEEEHMKFDKN
QVGLLDALLSSQDSVSYDDQFATLKERFKSFEGVETALAPEEFIGDLRGYQREGLGWLSF
LQEFNFGGCLADDMGLGKTVQLLALLSKWHKQPQKQPPSLIVVPKSLMFNWKSEALRFTP
DLKVMEYAGLDREPLLEEFENFDLVLTTYGTTRRDVMKLRERQFSYIVLDEAQTIKNPGS
QVAKAVRLLNAKHRIALSGTPIENHLGDLWSIFEFLNPGMLGRSSLFKAVSSGTGNEQTK
MVLAKGLRPFILRRTKQEVASELPEKIEQTIYCEMDKEQNDLYDELRDHYRDSLLGMIAE
QGISKSKMHVLEALLRLRQAACHPGLLNKSHRARASAKLKVLIPQLEELAAEGHKALVFS
QFTSMLSIVKDHLDKQNIKYEYLDGKTRKREECVNRFQEDPDCPVFLISLKAGGLGLNLT
AAEYVFLLDPWWNPAVEAQAIDRAHRVGQTKQVFAYRLICRNTVEEKISELQSKKRDLAE
AILEAEGSLMSNLTTEDLEMLLS
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtcagacatcctggagtcacaatttcgaggcgacattcgttttaggggcgct
tcttttctggaaacagaacgggtcgcgatctcccgagccaccgcagacaatattttcggc
acggttcgggattcccccagctccgtcgagtttcaaacacagatcagtcgagccgacaac
ggagtcaagctcttctgcagttgttcgactcacctcgacaaaccgagctgtcgccacctg
tgggcaacgattctcgctgccgagcaggaaggtattatccctggggccttgcgtcccggt
ttcttccctccgttcaatggcaccgaggtcgaattccaactctccaacgacgacgagtgg
gatgatgaaccagacatcggtcaattgatgtccgggttgtcgacatcgaagaaagaaacg
accgttgtcgacccacccagaaagcgaactcgcccctgggaaacggacctgctcaaaatc
cgtgaggcgctactgacgcggcacgaaacgtcgcgcggccccagtaagtctcgcgaaatc
ctctacgagctcgacctggaatcctcgcgcgcatcgggtgcactgatggttcaaacctcg
cagcgccaacgtcgggctgataatacttggggcaaagagaaaccgctcaaacttaaattg
agccagctttccgatgtggaaaactcgcttgaccgtaaaattttgacgtacttgctcggc
ggaacgccggaaaaagcaggtgctccctcgaatcaggccgatactcaattcctcgctttt
cggttcgccatcagttacgaactatgcgatctgctgctccccatgctggcggagtcggag
cgattccggttacttgatgctcctgtctcaaaccctatttgctggcagcctgatcgcatc
tgggatttcagtattgagatgcaaaccaatgacgacggtgactgggaactgctgggtgaa
ttggaacgggatggcaaacggatgccgctttcccaagctgatctcctcatcccaggcggc
ctcgttctcatcggaaataaactttccaaactacgggactacgacgcattcgagtggatg
gaaatattccagcaggaaggtaagttcatcattccctccgatgacgaaaaagacttcgtt
aacctgctttatgaaatccctgaggttccccggttacatattccttcggaactgaaactc
gaagaagtcactggtactcctaaattcattttgagactgacgacaccatctggacgtcgc
tggaaaaacgagactttacgcggaaatgtgcaattcgactatgacgatacgattgtcgaa
gcacgacaccgcaattgggccatcgtcgaccgcgatgcggaagtctgtctggtacgtaac
cgggaacacgaagagaaagcattcatccaacttcaatcggccggattccggcgagttttg
atgggagccaatcagaaatcagacgtcgaaattccacccgcccatttgggaacagctgtt
cgcaagttgatggaagataactggcaggtgctcgccgacgataagaaagttcggcaatcg
ggcaatctgacttttcgcgtcgacacaaacatcgactggtttgaactgcatgccgacttc
gatttcgacggcaaactggcctcattcccagaacttctctcagcaatcgcccgaggcgac
aatacgatacggctggacgatggttccctcgggattattccggaagagtgggcccgtcaa
ttcgggttgctcgccaacctgggggtctccgaagaagaacacatgaagttcgacaagaac
caagtcggactactcgacgccttgcttagctcacaggattccgtcagttacgacgaccag
ttcgcaactttgaaagaacgattcaaatcgtttgaaggtgtggagactgcgttggcaccg
gaagaattcatcggggatcttcgaggatatcagcgagaaggtctgggctggctcagcttt
ttacaggaattcaattttggtggttgcctggccgacgacatgggtctgggtaaaaccgtc
caactgctcgccttattgtccaagtggcacaaacaacctcagaaacaacctccatcgttg
attgtcgtccccaaatcgttgatgtttaactggaaatcagaagcactccgatttactccc
gacttaaaagtgatggaatacgcaggcttggaccgggaaccactgttagaagaattcgaa
aacttcgatctcgttctcacaacatatggaacaactcgacgcgatgtcatgaaacttcgt
gagcgacaattctcgtacatcgtgcttgatgaggcacaaaccatcaagaacccgggctcg
caggttgcgaaagcggtgcggcttctcaatgcaaagcatcgcatcgctctgtcaggtaca
ccgattgagaaccatttgggtgacctctggtcgatcttcgaattcctcaatccagggatg
ctgggacgcagctctctgttcaaagcggtttcgtctggaacagggaacgagcagaccaaa
atggttctcgccaagggcctgcggccattcattctgcgacgaaccaaacaggaggtcgcc
tcggaacttcctgaaaaaatcgaacagaccatttactgcgaaatggacaaagaacagaac
gatctgtacgacgagctacgggatcactaccgcgattcactgctgggcatgattgcggag
cagggcatctcgaagtcaaaaatgcacgtactggaagcgttattacgactgcgacaggca
gcttgccacccaggcttgctcaacaaatcgcatcgtgcccgggccagtgccaagctcaaa
gtgcttattcctcaactggaggaactggcggcggaagggcacaaagcactcgtcttttct
cagttcacgagtatgctctccatcgtcaaggaccacctcgacaagcagaacatcaagtac
gaatacctcgatggcaaaacccgtaaacgcgaagagtgcgtgaacaggttccaggaagat
cccgattgcccagtcttcctgatcagtctgaaggcagggggcctcggtctcaacctgacg
gctgccgagtatgtcttcctgctggacccctggtggaatccggctgtcgaagctcaggca
atcgaccgggcacaccgcgtcggccagacgaagcaggtcttcgcctaccggctgatttgt
cgcaacacggtcgaagagaaaatctccgaacttcaatcgaagaaacgagacttggccgaa
gccatcctcgaagccgaaggcagcctgatgtcgaacctgacgaccgaagatctggagatg
ctgctctcgtaa
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