Polystyrenella longa: Pla110_25480
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Entry
Pla110_25480 CDS
T06945
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plon
Polystyrenella longa
Brite
KEGG Orthology (KO) [BR:
plon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plon03009
]
Pla110_25480 (rimO)
Enzymes [BR:
plon01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Pla110_25480 (rimO)
Ribosome biogenesis [BR:
plon03009
]
Prokaryotic type
ribosomal protein modification factors
Pla110_25480 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDU80813
UniProt:
A0A518CNL6
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All DBs
Position
3305017..3306405
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AA seq
462 aa
AA seq
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MSTTDTTTIADTKTKGTYAFVSLGCPKNLVDSEKMLGNLSLDGYSLVSEPDQADFVIVNT
CGFIESARQESKAVIQEMLDLKAAGKTKGVIVSGCLPERLGSKLLDEMPQIDHIVGVFGR
DEITTVAERIVSGAKEQRELFRPAAIRAQDDTARLRITPGHYAYLKISEGCDRTCTFCAI
PKMRGKHVTKPIEMVRREAEELVADGVKELILVAQDTTYYGMDLYGEVRLADLLKELEKV
EGLQWIRLMYLYPINFTDELIDTIAKSSKIIPYLDMPLQHSNDRMLKRMQRRVNREKTEI
LLEKLRERVPNLVIRTTFVVGFPGETEKQFIELKEFVRDQHFERVGVFTYSLEPGTPAER
LPDHLPEDIKQRRYDELMEVQQEIAFEHADSWVGYELDVIIDEQVEDDLWVGRTFADAPE
IDSLVYVRGEDLQIGQLVPVEILQRQDYDLIGVVSEGEMEED
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaccactgatacaacgactattgctgacactaaaaccaaagggacctacgctttc
gtaagcctgggttgccccaagaatcttgtcgacagcgaaaagatgctgggcaacctctcc
ctggatggctactcgcttgtttcggaacccgatcaagccgactttgtcatcgtgaatacc
tgcggttttattgaaagcgcacgacaggaatctaaagcggtcattcaggaaatgcttgat
ttgaaagcagccggaaaaaccaaaggagtcatcgtttcgggttgtctccctgaacgactg
ggcagcaaactgctagacgagatgcctcagatcgatcatatcgtcggcgtatttggtcgt
gacgaaatcaccaccgtcgccgaacgcatcgttagtggagccaaagaacaacgcgaactc
tttcgtccggctgctatccgagcccaggacgatactgcccgactgcgaatcacaccgggg
cactatgcttatcttaaaatctccgaaggttgtgaccgaacttgtacgttctgtgcgatt
cccaaaatgcgtggcaagcatgtgacgaaaccgattgaaatggttcgtcgtgaagccgaa
gaactggtcgccgatggagtcaaggaattaatcctcgtcgcacaggacacgacttattac
ggcatggacctgtatggggaagtccgccttgctgacttgcttaaagaactggaaaaagtc
gaaggactccagtggattcgattgatgtatttgtatccgatcaacttcaccgatgaactg
atcgatacgattgccaagagcagcaaaatcattccttatctcgatatgccgctccagcac
agtaatgatcgcatgttgaagcgaatgcaacgtcgtgtgaaccgggagaagacggaaatc
ttgttggagaaattacgcgaaagagttcccaacctggtgattcgcaccacattcgtcgtc
ggattccctggcgaaacggaaaaacagttcatcgaattgaaagagttcgtccgcgaccaa
catttcgaacgggtgggtgttttcacctattcactcgaaccaggtactcccgcggaacgt
cttcctgatcacctacctgaagacatcaaacagcggcgttacgacgagctgatggaagtc
caacaggaaatcgcttttgaacatgcggattcctgggttgggtacgagttggacgtgatc
attgacgaacaggtcgaagacgatctctgggtggggcgaacatttgccgatgcacccgaa
atcgatagtcttgtttacgtacgcggcgaagatctacagattggacaattagtccccgta
gagatattgcagcgacaagactacgacttgatcggtgttgtttcggaaggcgagatggaa
gaagattaa
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