Polystyrenella longa: Pla110_38630
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Entry
Pla110_38630 CDS
T06945
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plon
Polystyrenella longa
Pathway
plon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pla110_38630 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plon03021
]
Pla110_38630 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
plon03400
]
Pla110_38630 (rpoA_2)
Enzymes [BR:
plon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pla110_38630 (rpoA_2)
Transcription machinery [BR:
plon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pla110_38630 (rpoA_2)
DNA repair and recombination proteins [BR:
plon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pla110_38630 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
TPR_7
TPR_12
TPR_16
ARM_TT21_N
TPR_5
TPR_11
TPR_9
TPR_10
TPR_CcmH_CycH
TPR_Slam
ARM_TT21_C
HEAT_Nup120
NatA_aux_su
MIT
Motif
Other DBs
NCBI-ProteinID:
QDU82108
UniProt:
A0A518CSB5
LinkDB
All DBs
Position
5033046..5034368
Genome browser
AA seq
440 aa
AA seq
DB search
MPEDQVNIQQLLQGGSHFGTIEVSKLRSVIATNQFVDVRREVNALQSNVDANPAPTETEL
VKAGISSYLMGDHEKSNDYLSKIQNDPVGTFYHACVLNALGQQEEASKKFQTAAQLGYDR
IECTLRQAGTLREYGQLDDAEQLLRSVAAEAASRAEYSYQMGCILSDRGDTYGAIEYFER
AVDMNNQHSPALFRLAAENALRGNDQEAIRLYEQALSKPPFYMGALMNLGLLYEDSENYN
AAAFCFRKVLDADPSNQRAKLYLKDIRATEDMFYDEESAKNEARMEQLLGRPITDFELSV
RSRNCLQAMDINTLGDLTTTTEQDLLGGKNFGETSLKEIREMLTAHSLSIGQNLKKKTSD
TSYQMQNLSPQEQMMLNKPISELDLSVRARKCMSRLNMSTIGELLQKTPDELLSSRNFGV
TSLNEIRAKLQEMNLSLRND
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagatcaggtcaatattcaacaattacttcaaggcggctcccatttcggaacc
attgaagtcagtaaactacgttctgtcatcgccaccaatcagtttgtggatgtccgccgg
gaggtcaacgccctgcaaagcaacgttgatgccaaccctgcaccgaccgaaaccgaattg
gtgaaagcgggcatttcctcatatctgatgggagatcatgaaaagtcgaacgactatctc
tccaagatccagaatgaccccgtgggtactttctatcatgcctgcgtcctgaacgccctt
ggacaacaggaagaggccagcaaaaagtttcagacggcagcccaattgggttacgatcgt
attgaatgcacgctgcgtcaggcaggtactctgcgagaatatggtcaactggacgatgcg
gaacaacttctccgaagtgttgccgccgaagctgccagtcgagccgagtattcttatcag
atgggatgtatcctgtcagatcgaggcgacacttacggtgcgattgagtacttcgagcgt
gctgtcgacatgaacaaccagcattcacccgcccttttccgcctggcagcagaaaatgcg
ctgcgcgggaacgatcaggaggcgatccggttgtacgaacaggctctctcgaagccaccg
ttctacatgggagctctgatgaatctggggctgctctacgaagacagcgaaaactacaac
gcggcagcattctgcttccgtaaagttctggatgcagatccttccaaccagcgtgccaag
ctgtacttgaaagacatccgtgccactgaagacatgttctacgatgaagaatcggccaag
aacgaagctcggatggagcaacttctcggtcgaccgatcaccgacttcgaactttcagtt
cgctcgcgcaactgtctgcaggccatggatatcaatacccttggcgatctgacgaccacg
acagagcaagatttgctcggcggtaaaaacttcggtgagacttcactgaaagaaattcgc
gaaatgctgacggcccacagcctgtcgatcggtcaaaacctgaagaagaaaacatccgac
acttcttaccagatgcagaatctcagtcctcaagagcagatgatgctcaacaaaccgatc
agcgaactggacttgtctgttcgcgctcgcaaatgcatgtctcgtctgaatatgtcgacg
attggcgaattgctccagaaaactccggacgaattgctctccagccgtaacttcggcgtg
acgtcactcaacgagattcgtgcgaagctccaggaaatgaacctgtccctacgcaacgac
taa
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