Perognathus longimembris pacificus (Pacific pocket mouse): 125338704
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Entry
125338704 CDS
T08928
Symbol
Lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125338704 (Lrrc49)
04812 Cytoskeleton proteins [BR:
plop04812
]
125338704 (Lrrc49)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
125338704 (Lrrc49)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
125338704 (Lrrc49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
FTH
LRR_6
Motif
Other DBs
NCBI-GeneID:
125338704
NCBI-ProteinID:
XP_048185609
LinkDB
All DBs
Position
20:42980448..43028630
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AA seq
754 aa
AA seq
DB search
MIPGRYRSASGRAANNVNCGLHLVIQTSSLPEKNKVEFKINRETPPFPGRLLQHDLERNY
SSRQGDGIAVSPSPRNKSSCLSSTTNLTELCGLDMKSGASSLSAFGDSSFQTPSKYRVRQ
GCHSAGPDVSGDHINLVSSSMPSFPILQRSTEEKILYSDRLTLERQKLTVCPIIDGEEHL
RLLNFQHNFITRIQNISNLHRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKRISNL
ENLKLLDVLDLHGNQITKIENVNHLCDLRVLNLARNHLSHVDNLNGLDSLTELNLRHNQI
TYVRDVDNLPCLQRLFLSFNNICSFESVACLADSTSLSDITFDGNPIAQESWYKHTVLQN
MMQLRQLDMKRVTEEERRVASVVAKKEEEKKRESHKQSLLKEKKRLTIHNVARKWGLQQQ
RIASQETRGPDSPPQDPCQVPLDGGGGGHEAGPPEEAGPADAGLSSALQGLSVADTHLVE
IDGDTLSLYGSGALESLDRNWSLQTVGAVTTISFTFIEFDEIVQVLPKLKMKFPNPLHLK
FKETNLVMLQQFNALAQLRRIEQLTIDPQGNPVVNFTLWKYYVLFRLSHFGMQKINGTEV
TQNDLVMAERLFGILAHVASSELPQYRLISILGDARRKHFRYLLDSKGKKPCLLPEETSD
SKRLVGENSNRATLNYTTREFYTEKLEEIKEKKQFCQLYVEDLVKEASDINTKNAALQRL
WPQMFIELVRDAVLDIRHKSSYTQLCLQQIAGRK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgggaggtaccgctccgcctcgggccgggccgccaacaacgtgaactgtggt
ctccacctggttattcagacatcttcccttcctgaaaagaacaaagttgaattcaagatt
aacagagaaactccaccatttccgggtaggctcttacaacatgacctggaaagaaactac
tcaagcaggcaaggagacggaattgccgtaagtccttcgcctcgtaataaatcatcctgc
ctctcgtccacaacaaacctgacagagctgtgtggtctggacatgaaaagcggtgccagc
tccttgtcggcctttggagattcttcctttcagacaccttccaagtaccgcgtgcggcag
ggctgccatagcgcaggccctgatgtctcgggtgatcatattaatttggtgagctcatca
atgccatcctttcctattctccagcgttccactgaagagaaaatcctttactcagacaga
ctgaccctagaaaggcagaagctgactgtgtgtcctatcatcgacggggaggagcacctg
cgcctgctcaacttccagcacaattttataacgcggatccagaatatctctaatctgcac
cggctgatattcctggacttatacgacaaccagattgaagagatcagcgggctctccaca
ctgcggtccctccgcgtcctcctcctggggaagaacagaatcaaaagaatctcaaatctg
gagaatctgaaactcttagatgtcttggaccttcatggaaatcagattaccaaaatcgaa
aatgtcaatcacttgtgtgatttgcgagttttaaaccttgcccggaaccatttgagtcac
gttgataatctcaatggtctggattctctaaccgagctgaaccttcggcacaaccaaatc
acttatgtgagagatgtggacaacctgccctgcctccagcgcctgttcctcagcttcaac
aacatctgtagctttgaaagcgtcgcctgccttgctgactccacttcgctgtcggacatc
acttttgatggcaaccccatagctcaggagtcatggtacaagcacacggtcctgcagaac
atgatgcagctgcgccagctcgacatgaagagggtcacggaagaagaaaggcgcgtggcg
tctgttgtagccaagaaagaagaggaaaagaagcgtgaaagccataaacaatccttgctg
aaggagaagaaacggctaacgattcacaatgtcgcccggaagtggggcctgcaacagcag
cgcatcgccagccaggagaccagggggcccgactccccgccccaggacccctgccaggtc
ccgctggacggtggcggtggcggccatgaggccggccctccggaggaggcgggccccgcg
gacgcggggctcagcagtgccctgcagggcctgtcggtcgcagacacgcacctggtggag
atcgacggggacacgctgtcgctgtacggctcgggagccctggagtcgctggaccggaac
tggagcctgcagacggtgggggccgtcaccaccatctccttcaccttcatcgagttcgac
gagatcgtgcaggtgctgcccaaactgaagatgaagttccccaaccccctgcacctgaag
ttcaaggaaaccaacctggtgatgctgcagcagttcaacgctctggcccagctccggcgc
atcgagcagctgaccatcgacccgcagggaaaccccgtggtcaatttcacgctctggaaa
tactacgtgctcttccgcctgagccatttcggcatgcagaaaatcaatgggacggaggtg
acgcagaacgacctggtgatggccgagcggctgttcgggatcctggcgcacgtggcgtcg
tcggagctgccgcagtaccgcctcatctccatcctgggcgacgccaggagaaagcacttc
cgctacctgctggactccaaggggaagaagccctgcctgctcccggaagagaccagcgac
agcaagagactcgtgggggagaactcgaaccgcgccacgctcaactacaccaccagggag
ttctacacggagaagctggaggagatcaaggagaagaagcagttctgccagctgtacgtg
gaggatctggtgaaggaggcctcggacatcaacacgaagaacgcggccctgcagaggctg
tggccgcagatgttcatcgagctggtgcgggacgccgtgctggacatccgccacaagagc
tcctacacgcagctctgcctgcagcagatcgcgggccgcaagtag
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