Perognathus longimembris pacificus (Pacific pocket mouse): 125338709
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Entry
125338709 CDS
T08928
Symbol
Pop4
Name
(RefSeq) ribonuclease P protein subunit p29 isoform X1
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125338709 (Pop4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125338709 (Pop4)
03016 Transfer RNA biogenesis [BR:
plop03016
]
125338709 (Pop4)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125338709 (Pop4)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125338709 (Pop4)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125338709 (Pop4)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125338709 (Pop4)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125338709 (Pop4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P-MRP_p29
TAFH
Motif
Other DBs
NCBI-GeneID:
125338709
NCBI-ProteinID:
XP_048185621
LinkDB
All DBs
Position
20:13485880..13492705
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AA seq
221 aa
AA seq
DB search
MTSMIYRALSQKEAGEHAVQQQPGAQRAQAFVKAFLKRSVPHIRQQLCEDELQRKAVVLE
YFTRRKRREKRKKSKGLSARQRRSLRLFDIKREQQRYDLFLPLHELWKQYIRDLCHGLRP
DTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGVTGILLQETKHVFRIITREDQLKVIPK
LNCVFIVEIDGFISYIYGSKFQLRSSERSAKKFKAKGSIDL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtatgatctaccgtgccctttctcagaaagaagctggagagcatgctgtgcag
cagcagccgggagcgcagcgggcacaggcctttgtgaaggcctttttgaagcgcagtgtc
ccccacatacggcagcagctctgcgaggatgagctgcagcgcaaggctgtggtcctcgag
tatttcactcgccggaagcgaagagagaagaggaagaaatccaaaggcctctccgccagg
cagaggcggagcctgcggctgttcgacattaaacgggagcagcagaggtatgaccttttt
ctccctctgcatgagctctggaaacagtacatccgggacctgtgccatggtctgaggcca
gatacgcagccacagatgattcaggccaagttgctcaaggccgatctgcatggtgctatc
atttcagtcaccaagtccaagtgcccctcatatgtgggcgtgacgggcatcctcctacag
gagacgaagcacgtgttcaggattatcaccagagaggaccagctgaaagtgatccccaag
ctaaactgtgtgttcatagtagaaattgacggctttatttcctacatttatgggagcaaa
tttcagctgcggtcaagtgagcggtctgccaagaagttcaaggccaagggaagcattgac
ctgtga
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