Perognathus longimembris pacificus (Pacific pocket mouse): 125338726
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Entry
125338726 CDS
T08928
Symbol
Snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125338726 (Snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125338726 (Snrpa)
Spliceosome [BR:
plop03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
125338726 (Snrpa)
Complex B
125338726 (Snrpa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
125338726
NCBI-ProteinID:
XP_048185644
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All DBs
Position
20:complement(19226420..19234639)
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AA seq
284 aa
AA seq
DB search
MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPS
AKKAVQGGAAAPVVGAVQGPVPGMGMPPMTQAPRLMHHMPGQPPYMPPPGMIPPPGLAPG
QIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVR
LVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcctgagacccgtcccaaccacacaatttatatcaacaacctcaacgagaag
atcaagaaagatgagctgaaaaagtccctgtatgccatcttctcccagtttggccagatt
ctggatatcctggtgtcacggagcctgaagatgaggggccaggcttttgtcatcttcaag
gaagtcagcagtgccaccaatgccctgcgctccatgcagggcttccccttctatgacaag
cccatgcgaatccaatatgccaagacggactcggatatcattgccaagatgaagggcacc
tttgtggagcgggaccgcaagcgggagaagaggaagcccaaaagccaggagaccccatct
gccaagaaggctgtgcagggtggggcagctgcccctgtggtgggagctgtccagggccct
gtcccgggcatgggcatgccgccgatgactcaggcaccacgcctcatgcaccacatgcca
ggacaaccaccgtacatgccgccccctggcatgatcccaccaccaggcctcgcgccgggc
cagatcccaccaggagccatgcccccacagcagctcatgccagggcagatgccacctgcc
cagcctctttctgagaacccgcccaatcatattctgttcctcaccaacctgccagaggag
accaatgaactcatgctgtccatgctcttcaaccagttccctggcttcaaggaggtacgc
ctggtccctgggcggcacgacatcgccttcgtggagtttgacaacgaggtacaggcaggg
gcggctcgcgatgccctgcaaggcttcaagatcacccagaacaatgccatgaagatctcc
tttgccaagaagtag
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