Perognathus longimembris pacificus (Pacific pocket mouse): 125338842
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Entry
125338842 CDS
T08928
Symbol
Fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125338842 (Fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125338842 (Fanci)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
125338842 (Fanci)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
125338842
NCBI-ProteinID:
XP_048185843
LinkDB
All DBs
Position
20:complement(31480329..31516505)
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AA seq
1318 aa
AA seq
DB search
MDQKILSLATSKTTDRLQEFLRTLREDELTNLLQNQAVAGKAAGALVRAIFKGSPCSEED
GALRRRKIYTYCIQLVESGDLPKQVASELIGSLMLEAHRFPGPLLVELATEFVGMIKDGN
LVNGKSLELLPIILVALSTKKENLTYGTGELSGEECKKELINTLCSGKWDQQHIIQLTSM
FKDIPLTAEEVEFVVDKVLKMLSMLNLQEIPPLVYQLLVLSSKGSRKTVLEGIVSFFREL
DKQHSEDQSGDELLDLVTVPSGELRHVEGTIILHVVFAIKLDSELGRELLKQAKAGQQGD
PSRYFCPFSVALLLSVTGIQRFEEQVFDLLKSSIMRCFKDLQLLKGSKFLQNLVPQRTCI
STIILEVVKNSAHSWDHVTQGLVKLGFILMDSYGPKKIGDGKAVETSSSLSKTPSQHACD
LGARILLETFKVHEVIRQEILEQVFNRVITRASSPISHFLDLLSDIILYAPLVLQNCSSK
VTETFDYLSFLPLQTVQGLLKAVQPLLKVSMAVRDSLILVLRKAMFASQLDARKSAVAGF
LLLLKNFKVLGSLASSQCSQSIGVSQVRVDVHSRYNSVANETFCLEIMDSLRRCLGQQAD
IRLMLYEGFCDVLRRNSQLASSIMQALLSQLKQYYEPKPDVLPPLKVEACVLTQGNQISL
QEPLDYLLCCTQHCLSWYKSTVLPLQHGDADEEEEGVYQELDDMLGSITSRMVKSELEDF
ELDKSADFSQSTNTGIKNHMSAHLVMGVCEVLIEYNFYISNFSKNKFEEILSLFMCYKKL
SDIVNEKTGKGKSKMANKTNESFLSMKFVSDLLTALFRDSTQSHEESLSVLRSSTEFLRY
AVSVALHKAQQLKETGHVGGPDSHNPNKTFQSLCDITRVLLWRYTSIPTVVEDSGKKERG
KSISLMCLEGLEKILSAVGQFFQPKVQQFLRALDNEEDGVDVPVTQRAAFQIRQFQRALL
NLLSSGEEDFNSKEAQLLVAVLASLSRLLEPSSPQFLQMLNWTCKICKENSREDALFCKS
LMNLLFSLHVLYKSPVTVLRDLSQDIHGQLGDIDEDCEVEKSDHFAMVNLKTAAPTACLL
VLSQAEKVLEEVDWLITNLKGLPSQETSSEEASPPATLPSYAATKGIVMQLGTLLTCFHE
LVQTALPSGSCVDTLLKGLCKMYTTLTALVRYYLQVCRSSGGIPRIMEKLVKLSGSHLTP
LCYTLISYVQNKNSNNGKCTDEKKEKTAAMAKVLRETKPIPNLVFAIEQYEKFLIHLSKK
TKVNLMQHMKLSTSRDFKIKGDVLDTILREDAEDGSEEVPAPEHSGQDEEPVKKKRKK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaaaattttatctctggcaacaagtaaaacaactgatagactgcaggaattc
cttagaaccctgagagaggatgagttgactaatctccttcagaatcaagcagtggcaggc
aaagctgctggagctctggtgagagccattttcaaaggctctccctgctctgaggaagat
ggagcccttaggagacgaaagatatatacttactgtatccagttggtcgaatcaggagat
ttaccaaaacaagtagcctctgagctcataggatccctaatgctggaggctcaccgtttt
ccaggaccattactggttgaattagccactgagtttgttggcatgatcaaagacggcaat
ctagtgaatggaaagtccttggagttgttgcctatcattttggtagcattgtctaccaaa
aaggaaaatctgacatatgggacaggtgaattgagtggggaagaatgtaagaaggagttg
attaacactctctgttctggcaaatgggatcaacaacatataatccagcttacctccatg
ttcaaggacatccctctgactgcagaagaagtggaatttgtagtggacaaagtgttgaag
atgctgtccatgttgaatcttcaagaaataccacctttggtctatcagcttctagttctc
tcctcaaagggaagtagaaagactgttttagaaggaatcgtgtcgttcttccgagagctg
gataagcagcatagtgaggatcagagcggtgatgagctgctggatcttgttactgtgccg
tcaggtgagcttcgccatgtggaaggcaccattatcctccacgtggtgtttgccatcaag
ttggactctgagctaggcagagaacttctgaaacaagcaaaggcagggcagcaaggagat
cccagtagatacttttgtcctttcagtgtggctcttcttctctctgtaacaggaatacag
cgctttgaagaacaggtgtttgatctcttaaagagttcgatcatgagatgctttaaggat
ctacagctcctcaaaggttcgaaattccttcagaaccttgttcctcaaagaacttgtatt
tcaaccatcatcttggaagtggtgaagaatagtgctcatagttgggatcatgtgactcag
ggcctggtgaaacttggttttattctgatggattcatatggcccaaagaagattggtgat
ggaaaagctgttgaaaccagctccagtctttctaagacaccaagccagcatgcctgtgat
ctgggtgcccgtatcttgctggagacgttcaaggtccatgaggtgatcagacaagaaatt
ctggagcaagttttcaacagagtcattaccagagcatcctctcccatcagtcatttctta
gacttgctctcagatatcatcttgtatgcaccgttggttcttcagaattgttcttctaaa
gtcacagagacatttgactatctgtccttcctgccgcttcagaccgtgcaaggattactt
aaggctgtgcagccgcttctcaaagtcagcatggcagtgagagactccctcatcctcgtc
cttcggaaagccatgtttgccagccagcttgatgcccggaagtctgcagttgctgggttt
ttgttgctgctgaagaactttaaggttttgggcagcctggcatcttcgcagtgcagccag
tctatcggcgtcagtcaggttcgtgtggatgtccacagccgttacaattctgttgccaat
gaaaccttttgcctggagatcatggacagtttgcggcggtgcttgggccagcaggccgac
attcgcctcatgctgtatgagggcttctgtgatgtgcttcgaaggaactctcagctggca
agctccatcatgcaggcgcttctctcgcagttaaaacagtactatgagccaaaacctgat
gttctgccgcctctgaaagtagaagcttgtgttctgacacaagggaatcagatctctctg
caagaaccattggattacctgctgtgctgtacccagcattgtttgtcctggtacaagagc
acagtgctgcccctacaacatggagatgccgacgaggaggaagagggcgtctaccaagag
ctagatgacatgctggggtctattaccagtagaatggttaagagtgagctagaagacttt
gaactcgataaatctgcagatttttctcagagcaccaatactggcatcaagaatcacatg
tctgcacaccttgtgatgggtgtctgtgaggttctgatagaatataatttctacataagt
aacttcagtaagaataagtttgaggagattctgagcttattcatgtgttataagaagctc
tctgacatcgttaatgaaaaaactgggaaaggcaaaagcaaaatggccaacaagacgaat
gagagttttttgtctatgaaatttgtgtctgatcttctcacggcgcttttcagggacagc
acccaaagccatgaggagagcctgtctgtcctcaggtccagcactgagttcctgcgctac
gcagtgagtgtggctctgcacaaggcgcagcaactcaaggagacagggcacgtgggcggc
cctgacagccacaaccccaacaagaccttccagagcctctgcgacatcactcgggtcctg
ttgtggagatacacttcaattcccacagtcgtggaagactcggggaagaaggagaggggg
aagagcatctcactgatgtgcctggaaggcctggagaagatcctgagcgccgtgggccag
ttcttccagcccaaggtgcagcagttcctcagggctctggataatgaagaggacggcgtg
gacgtccctgttacgcagagggcggccttccagatccgacagttccagagggccttgttg
aacttactcagtagcggagaagaggattttaatagcaaagaagcccagctgctggtcgcc
gtcctcgccagcttgtccaggctgctggaaccttcctctcctcagtttttgcagatgtta
aactggacatgtaagatttgcaaggaaaacagcagggaggatgctttgttttgcaagagc
ttgatgaacctgctcttcagcctgcacgtgctgtacaagagccccgtcactgtgctgcgg
gacctgtcccaggacatccatgggcagctgggagacatagatgaggactgcgaggtggag
aaaagcgaccactttgcaatggtgaacttgaagacggctgctcccactgcgtgtttgctt
gtcctaagtcaggctgagaaggtcctagaagaagtggactggttgatcaccaaccttaaa
ggactaccaagccaggaaacctcttcagaggaagcctctcctccagcaaccctcccaagc
tacgccgctacgaaaggcatcgtcatgcagctgggcacgctgctcacgtgcttccacgag
cttgtgcagacagccctgccctcgggcagctgcgtggacaccctgctgaagggcctgtgc
aaaatgtacaccacgctcaccgccctcgtccgatactatctccaggtgtgccggagctcc
ggaggaattcccagaattatggaaaagctggtgaagctgtctggctcgcacctgactcca
ctgtgctacacattgatttcttacgtgcagaataagaacagtaacaacgggaaatgcaca
gacgagaagaaagagaaaactgccgccatggccaaagttcttcgggaaaccaagcccatc
cctaaccttgtctttgccatcgagcagtatgagaaatttctcatccatctttctaagaag
accaaggtgaacctcatgcagcacatgaagctcagcacctcccgcgacttcaagatcaaa
ggcgacgtcctggacacgattctccgagaggatgcggaggatggaagtgaagaggtccct
gcaccagagcacagcggacaggacgaagaaccagtcaagaagaaaaggaaaaaatga
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