Perognathus longimembris pacificus (Pacific pocket mouse): 125338891
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Entry
125338891 CDS
T08928
Symbol
Arih1
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125338891 (Arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125338891 (Arih1)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125338891 (Arih1)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125338891 (Arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_14
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
125338891
NCBI-ProteinID:
XP_048185898
LinkDB
All DBs
Position
20:43640145..43702545
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AA seq
557 aa
AA seq
DB search
MDSDEGYNYEFDEDEECSEEDSGAEEEEDDDDDEPDDDNLDLGEVELVEPGLGVGGERDG
LLCGETGGGGGSALGPGGGGGGGGGGGGSGPGHEQEEDYRYEVLTAEQILQHMVECIREV
NEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSS
AQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILV
DDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCG
RQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHM
VCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNR
YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAF
YLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLL
QHVHEGYEKDLWEYIED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggctacaactacgagttcgatgaggacgaggagtgcagcgaggag
gacagcggcgccgaggaagaggaggacgacgacgacgatgagccggacgacgataacctg
gacctgggcgaggtggagctggtggagcccgggctgggcgtcggcggcgagcgggacgga
ctgctgtgcggagagaccggcggcggcggcggcagcgctctggggccgggcggcggcggc
ggcggcgggggcggcggcggcggcagcggcccggggcacgagcaggaggaggattaccgc
tacgaagtgctcacggccgagcagattctccaacacatggtggagtgtatccgggaggtc
aacgaggtcatccagaatccagcaactatcacaagaatactccttagccacttcaattgg
gataaagagaagctaatggaaaggtactttgatggaaacctggagaagctctttgctgag
tgtcacgtaattaatccaagtaaaaagtctcgaacacgccagatgaatacaaggtcatca
gcacaggatatgccttgtcagatctgctacttgaactaccctaactcgtatttcactggc
cttgaatgtggacataagttttgtatgcagtgctggagtgaatatttaactaccaaaata
atggaggaaggcatgggacagactatatcatgtcctgctcatggttgtgatatcttagtg
gatgacaacacagttatgcgcctgatcacagattcaaaagttaaattaaagtatcagcat
ttaataacaaatagctttgtagagtgcaatcgactgttgaagtggtgtcccgctccagac
tgccaccatgttgttaaggtccagtatcctgatgctaaacctgttcgctgcaagtgcgga
cgccagttttgctttaactgtggtgaaaattggcatgatcccgttaaatgtaagtggtta
aagaagtggattaagaagtgtgatgatgacagtgaaacctccaattggattgcagccaac
acaaaggaatgtcccaaatgccatgtcacaattgagaaggatggcggttgtaaccacatg
gtctgtcgtaaccagaactgtaaagcagagttttgctgggtgtgtcttggcccctgggaa
ccacatggatctgcctggtataactgtaaccgctataatgaggatgatgcgaaggcagca
agagatgcacaggagcggtcccgggctgccctacagaggtacctgttctactgtaatcgc
tacatgaaccacatgcagagtctgcgctttgagcacaagctgtatgctcaggtgaagcag
aagatggaggagatgcagcaacacaatatgtcctggattgaggtgcagttcctgaagaaa
gccgtcgatgtcctctgccagtgtcgtgccacactcatgtacacttatgtcttcgctttc
tacctcaaaaagaataaccagtccattatctttgagaataaccaagcagatctagagaat
gccacagaggtgctttcaggctacctcgagcgagatatttcccaagattctctgcaggat
attaagcagaaagtacaagataaatacagatactgtgagagtcgacgaagggttttatta
cagcatgtgcatgaaggctacgaaaaagatctgtgggagtacattgaggactga
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integrated database retrieval system
