Perognathus longimembris pacificus (Pacific pocket mouse): 125338980
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Entry
125338980 CDS
T08928
Symbol
Papolb
Name
(RefSeq) poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125338980 (Papolb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125338980 (Papolb)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125338980 (Papolb)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125338980 (Papolb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
125338980
NCBI-ProteinID:
XP_048185986
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All DBs
Position
1:76493375..76497981
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AA seq
643 aa
AA seq
DB search
MMPFPTVAPGAPPPAAPPQKHWGISSPISLAAPKDTDRELTRRLVETLKPFGVFEEEEEL
QRRILILEKLNNLVKAWIREISESRSLPQAVVDSVGGKIFTFGSCRLGVHTKGADIDALC
VAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTI
PEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYS
NILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLP
VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKADW
SKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNP
QSFPAPKENADKEEFRTMWVIGLVLKKPEDSDILNIDLTYDIQSFTDTVYRQAMNSKMFE
MDMKIAAMHLRKKELHQLLPNHVLQEKKAHLTEGVRLTTVNDSSLHMSVDSENNITVPLP
TSTIKASPLTSSSQGRNSPALSVMATSLSTIQASEVSLQHISPNESSGVALSESTPQPPS
QPTISAPPKPTVTRVVSSTHMVNHPPISSGNTATNISNPIVGV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtttccgacggtcgccccgggagcgcctccgccggccgcgccgccgcagaag
cactggggcatctcctccccgatcagcctggccgcccccaaggacacggaccgcgagctc
acccggaggctggtggagaccctgaagcccttcggggtgttcgaagaggaagaggaactg
cagcgcaggattctaattttggaaaaattaaataatctggtgaaggcctggatccgggag
atcagcgagagccgcagcctcccgcaggccgtggtggacagcgtcggggggaagatcttc
accttcggctcctgcaggctgggcgtccacacgaagggggctgacatcgacgcgctctgc
gtcgccccgaggcacgtggacagaagcgacttcttcacttccttctatgataaattgaag
ctgcaggaagaagtgaaagacttgagggcagttgaggaggcgtttgtgccagttatcaag
ctgtgctttgacgggatagaaatcgatattttgtttgcaagattagcactacaaaccatt
ccagaggatttggacctaagagatgacagtttgcttaaaaatttagatattagatgcata
cgaagccttaacggttgccgggtaactgatgagattttacatttagtgccaaacatcgac
aactttcggttaactctgcgagccatcaaattgtgggccaaatgccacaatatttattcc
aatatattaggtttccttggaggggtttcctgggccatgctagtagccagaacttgtcag
ctttatccaaatgcggtagcatccacgcttgtacgtaaatttttcttggtgttttccgaa
tgggaatggccaaatccggtgttactcaaagagcctgaagaacggaatcttaatttgcct
gtatgggacccaagagtgaatcccagtgaccggtaccatcttatgcccataatcacacca
gcgtacccacagcagaactccacatacaacgtgtctgtttcaaccaggatggttatgatt
gaggagtttaagcaagggcttgctataacacatgaaattttgctcaataaggcagactgg
tccaagctttttgaagctccaagcttctttcaaaagtacaagcactacattgtacttctg
gcaagtgcgccaacagaaaaacagcatctggagtgggtgggcttggtggaatccaagatt
cgaatcctggttgggaacttggaaaagaatgagtttatcacactggcacatgtgaatccc
cagtcatttccagcacccaaagaaaatgccgacaaggaagaattccgtacaatgtgggta
attggtctagtgttaaaaaagccagaagactctgacattctcaatattgatctcacttac
gacattcagtctttcacagacacagtttataggcaagcgatgaatagtaagatgtttgaa
atggatatgaaaattgctgctatgcatttaagaaagaaggaacttcatcagctacttcct
aatcatgttctccaggaaaagaaagcacacttaacagaaggtgtgagattgacaactgta
aatgacagcagcctccacatgtctgtagacagtgaaaacaacataactgtacctttgccc
actagcaccattaaggctagcccgttgaccagcagctctcagggcaggaacagtcctgcc
ctatctgtcatggcaacatctttgagtaccatacaggcttccgaggtttccttgcaacac
attagtcccaatgaaagctcaggtgttgcactgagtgaaagcactcctcagcccccctcg
cagcctaccatttcagcaccaccaaagcccacagtgaccagagtggtttcttcaacacat
atggtaaaccatccacctatatcttcaggaaacacagctacaaacatatctaatcctata
gtaggagtctag
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