Perognathus longimembris pacificus (Pacific pocket mouse): 125339016
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Entry
125339016 CDS
T08928
Symbol
Psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050
Proteasome
plop05010
Alzheimer disease
plop05012
Parkinson disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05017
Spinocerebellar ataxia
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125339016 (Psmc4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125339016 (Psmc4)
09164 Neurodegenerative disease
05010 Alzheimer disease
125339016 (Psmc4)
05012 Parkinson disease
125339016 (Psmc4)
05014 Amyotrophic lateral sclerosis
125339016 (Psmc4)
05016 Huntington disease
125339016 (Psmc4)
05017 Spinocerebellar ataxia
125339016 (Psmc4)
05020 Prion disease
125339016 (Psmc4)
05022 Pathways of neurodegeneration - multiple diseases
125339016 (Psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
plop03051
]
125339016 (Psmc4)
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
125339016 (Psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
TsaE
AAA_7
AAA_18
AAA_33
Parvo_NS1
AAA_17
AAA_lid_PRS2_C
NB-ARC
AAA_24
ABC_tran
AAA_25
DUF3450
Motif
Other DBs
NCBI-GeneID:
125339016
NCBI-ProteinID:
XP_048186032
LinkDB
All DBs
Position
20:18279514..18286043
Genome browser
AA seq
430 aa
AA seq
DB search
MRSSHPEAGSVTMEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQ
QELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTG
SNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIG
GMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFI
RVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRI
LLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTI
TSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIK
KDEQEHEFYK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccagccacccagaggccggctcagtcactatggaggagattggcatcttggtg
gagaaggctcaggatgagatcccagcactgtcagtgtcgcggccccagactggcctatcc
ttcctaggacctgagcctgaggacctggaggacctgtatagccgctacaagaaactacag
caggagctggagttcctggaggttcaggaggaatacatcaaagatgagcaaaagaacctg
aagaaggaattcctccatgcccaggaggaggtgaagcggatccagagcatcccactggtc
attgggcagtttctggaagctgtggatcagaacacagccattgtgggctctaccacaggt
tccaactactatgtccgcatcctcagcaccattgaccgggagctgctcaagcccaatgcc
tcggtggcgctgcacaagcacagcaacgccctggtggacgtgctacctcccgaggcagac
agtagcatcatgatgctcacctcggaccagaagccagacgtgatgtacgccgacattggg
ggcatggacatccagaagcaggaggtgcgcgaggccgtggagctcccactcacacacttt
gagctctacaagcagatcggcatcgatcctccgcggggtgtcctcatgtatggcccaccg
ggctgtgggaaaaccatgctggccaaggccgtggctcaccacaccacagctgcgtttatc
cgggtcgtgggctcggagttcgtgcagaagtacctgggcgaggggccccgcatggtccgc
gatgtgttccgcctggccaaggagaacgcacccgccatcatcttcatagacgagatcgac
gcgatcgccaccaagagattcgatgcccagacaggggccgacagggaggtacagagaatc
cttctcgagctgctaaaccaaatggatggatttgaccagaacgtcaacgtgaaggtgatc
atggctacgaacagagcagacaccctggacccagccctgctgcgtcccggccgtctggat
cggaaaattgaatttccactccctgatcgccgccaaaagaggttgattttctccaccatc
accagtaaaatgaacctttctgaggaggtcgacctggaagattatgtggcccggccagac
aagatttcaggagctgatatcaactccatctgccaggagagtggaatgctggccgtccgt
gagaatcgctacatcgtcctggccaaggacttcgagaaggcatacaagacggtgatcaag
aaggacgagcaggaacacgagttttacaagtga
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