Perognathus longimembris pacificus (Pacific pocket mouse): 125339019
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Entry
125339019 CDS
T08928
Symbol
Exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125339019 (Exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125339019 (Exosc5)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125339019 (Exosc5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125339019
NCBI-ProteinID:
XP_048186036
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All DBs
Position
20:18320851..18327632
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AA seq
229 aa
AA seq
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MEGAPHSQSGTESSPRAHSCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKM
NKEIFNKATLEVILRPKIGLPGVAEKSRERMIRNTCEAAVLGALHPRTSITVILQVVSDA
GSLLACCLNAACMALVDAGVPMKTLFCGITCALDSEGTLTLDPTDKQEKEARAILTFALD
SVEQKLLMSTTKGLYSDSELQQCLAAAQVASQHIFRFYRESLQRRYSKS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggccccgcattcccagagtggcactgagtccagtcccagggcccacagctgc
agcctgaggcactttgcttgtgaacagaacttgctctcccggccggatggctccgcttct
ttccttcaaggagatacctcagtcctggcaggtgtgtatgggccagcggaggtgaagatg
aacaaggagatctttaacaaggccacccttgaagtgatcctcaggccaaagatcgggctg
cctggtgtagctgagaagagccgggagcggatgatcaggaacacatgtgaagccgcagtc
ctgggagccctgcacccccgtacctccatcactgtcatcttacaggttgtcagtgatgct
ggctctctcctggcctgttgcctgaatgccgcctgcatggcactggtggatgcgggtgtg
cccatgaaaactcttttctgcggcatcacctgtgccttggactctgaggggaccctcaca
ctagaccccacagacaagcaagaaaaggaagctcgggccatcctgacctttgccctcgac
agtgtggagcagaagctgttgatgtccaccaccaaggggctctactctgattctgagctc
cagcagtgcctggccgcagcccaggtggcctcccagcacatcttccgcttctaccgggag
tcactgcagaggcgctactccaagagctga
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