Perognathus longimembris pacificus (Pacific pocket mouse): 125339074
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Entry
125339074 CDS
T08928
Symbol
Brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125339074 (Brat1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125339074 (Brat1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
125339074
NCBI-ProteinID:
XP_048186124
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All DBs
Position
1:complement(77785046..77796525)
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AA seq
820 aa
AA seq
DB search
MDLECSQLLPALCAALADPRQPLADDTCLEKLLDWLKNVTEIESSLLLLQENPALVELLS
HVLKSQDVSPRVLSFSLRLAGTFAAQEDCFLYLQQGELLLGLFGEGGPLCWAAWSVPTVR
SGWIQGLRSLAQHPSALHFLVDSGAVDTVLSLQGDPSLFVASAATQLLVHTLALSMQDGA
MGCSGLWGGVWPACAQKIVGHVEEFLQSTAAPQVTQALNVLTSTFGRCHSPWTEVLWGQL
CPLVAHLLERDPIPSVHSLVDLLLSVARSPALGSSHGGLWEVVAQALRCLSPMQAGPLAL
GMLKLPHCPQALRTQAFRVLLQPLACVVKANAQVPGSPGWLAGVEDSSLTVDLLLSSKSA
CVGILCQTLAQLEELQPLPQRPAPWPQEPLLGAAVTILQLCHGAATPSSSGGGRLCATLA
GCVRVQRAALDFLGTLSQETCSQELEQQVFAVLSEYLGSPDSSPMVLKKAFQTTLRWLLS
SPRTPGCPDLGPHPLLFLRELFPVLQKRLCSPGWEVRDSALEFLTQLSRHWGGQADFRQV
LLASEVPTLTQQLLQDPESYVRASAVAAAGQLSSRGLQDAPNSPEHPQTQQGLLGELLRI
LSTDSEGFPRRAVVQVFTEWLRDGHADVARDTEWFVATVLQVVSRDLDWEVRVQGLELAQ
VFLVQRLGRPCCPYTVDLPEAVSATPVPEVLQTLCRLQLFDFAFRALLDCDRPVAQKACD
LLLFLRDKTTVCSDPQEAGDIPGSASGQITLQRWQDGEQGQLPGDLQPEAVLALLRSTDL
EGLQARLSQSSDHVEKSPQSLLQDMLATVGVLGENEADCY
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacctggagtgctcccagctgctccctgctctctgtgctgcactggcggatcccagg
cagcccctggcagatgacacctgtctggagaaactgctggactggcttaaaaatgtgaca
gagatagagtccagtctcctgttgctgcaagagaatcccgccttggtggagcttctgtcc
cacgtgctaaagtcacaggatgtgagccccagggtcctctccttttccctgcgccttgct
gggacatttgcagcccaggaggactgcttcctctacctgcagcagggcgagttgctgctg
gggctgtttggggagggcggccccctgtgctgggcagcctggagtgtgcctactgtgcgc
agcggctggatccaaggcctgcgttccctggcgcagcaccccagtgccctacacttcctg
gtcgacagtggcgctgtagacaccgtcctctccctgcagggagaccccagcctgtttgta
gcctcggctgccacccagctcctggtgcacactttggctctgtccatgcaggatggagcc
atggggtgctctggcctctggggcggggtgtggcctgcctgtgcccagaagatcgtgggc
catgtggaagagttcttgcagtccacagctgccccgcaggtcacgcaggccctgaatgtc
ctgacttcaacctttgggcgctgccacagtccctggacagaggtcctctggggacagctg
tgtccccttgtggcccacctgctggagagagaccccatcccatctgtacactcactcgtg
gatctcctcctcagcgtggcccggtctcctgcgctcggctcttcccacggcggcctgtgg
gaggtggtggctcaggctctgcgctgcctaagccccatgcaagctgggcctctggccttg
gggatgctgaaactcccgcactgtccccaggcactgaggacccaggccttccgagtcctt
ctccagcctctggcttgtgttgtaaaggccaacgcccaggtccctggctccccaggctgg
ctggctggggttgaagacagctccctgacagtggacttgctgctgtcctccaagtcggcc
tgtgtagggatcctgtgccagaccctggcgcaactggaggagctgcagccactgcctcag
cgcccggcaccctggccccaggagccactgctgggcgctgctgtgaccatactgcagctc
tgccatggcgccgcgacccccagctccagtggcgggggccgcctctgtgccaccctggct
ggctgcgtccgtgtccagcgagctgccctcgacttcctggggacactgtctcaggagacg
tgctcccaggagttggagcagcaggtctttgctgtcctgtcggagtaccttggaagcccg
gactccagtcccatggtcctgaagaaggccttccagaccaccctccggtggctcctgagc
tctcccaggacaccagggtgtcccgaccttggccctcaccccctactattcctcagagag
ctgttccctgtgctgcagaagcgcctgtgcagccctggctgggaggtgcgcgactcagca
ctggagttcctcacgcagctcagccggcactggggaggccaggcggacttcaggcaggtg
ctgctggcgtctgaggtgcccacgctcacccagcagctgctgcaggaccctgagagttac
gtccgggccagtgcggtggccgccgctgggcagctgtccagccggggcctacaggacgcc
cccaacagtcctgagcacccacagacccagcagggcctgctcggggagctcctgcgcatc
ctgtcaacggattcagagggcttcccgaggagggctgtcgtgcaggtcttcaccgagtgg
ctaagggatggccatgctgacgtcgcccgggacacggagtggtttgtggccactgtgctc
caggtggtaagccgggacctggactgggaggtccgggtgcagggcctggagcttgcacag
gtgttcctggtgcagaggctggggcggccatgctgtccctacacggtggacctgcctgag
gctgtctcagccaccccagtccctgaggtgctgcagactctctgccggctgcagctcttt
gactttgcctttcgggccttgctcgactgtgaccgacctgtggcccaaaaggcctgtgac
ctcctcctcttcctgagggacaagaccaccgtatgcagtgacccgcaggaggctggggac
atcccaggctcggcctcggggcaaattactctgcagagatggcaggacggggagcaaggc
cagctcccgggagacttgcagcccgaggctgtgctggccctcctgaggtccacagacctg
gagggactgcaggcccggctgtctcagagcagcgaccacgtggagaagagcccccagtcc
ctcctgcaggacatgctggccacagtgggtgtactgggggaaaatgaggccgattgctac
tga
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