Perognathus longimembris pacificus (Pacific pocket mouse): 125339256
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Entry
125339256 CDS
T08928
Symbol
Hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125339256 (Hmbox1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125339256 (Hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_24
DUF494
CUT
HTH_26
HTH_37
HTH_31
HTH_23
NOC3p
Motif
Other DBs
NCBI-GeneID:
125339256
NCBI-ProteinID:
XP_048186277
LinkDB
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Position
21:complement(4949915..5036037)
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AA seq
444 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEVLHALETLDRLDQEHSDK
FGRRPSYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
NSERLSISNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APISIEDLEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAA
VNHTILALARQGANEIKTEALDDD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcctttccagtggttttgctggaaaccatgtctcactatacagatgagccc
agatttaccatagaacagatagatctgcttcagcgcctccggcgcactggaatgactaaa
catgaagttctccatgccttggaaacattggaccgtcttgaccaagagcatagtgacaag
tttggaagaaggcccagctatggaggaagttcatatgggaacagcaccaacaatgttcca
gcctcttcctctacagcgacggcttctacacagacacagcattcgggaatgtccccctcg
cctagcaacagttatgatacctccccacagccttgcactaccaatcaaaatgggagggag
aacagcgagcgattgtccatatcaaatgggaagatgtctccaactcgctaccatgcaaat
agcatgggtcagaggtcatacagttttgaagcctcagaagaggacctcgatgtagatgat
aaagtggaggaactgatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggcatcagtcagagc
cggatctcacactggctgttgcagcagggctcagaccttagtgaacagaagaaaagagcc
ttctaccgatggtaccagctcgagaagacaaaccctggggctacattaagtatgagacct
gcccccatttcaatagaggaccttgaatggagacaaacacctccccctgtctccgccaca
tctgggaccttccgtctccgacgaggaagtcgatttacctggagaaaggagtgtttggct
gtcatggaaagctatttcaatgagaatcaataccccgacgaagcaaagagagaagaaatt
gctaatgcttgcaatgcagttatacagaaaccaggcaaaaaactgtctgatctggaacga
gttacctccctgaaagtatataattggtttgctaatagacggaaggaaatcaagaggaga
gccaatatcgaagcagcaatcctggagagtcatgggatagacgtacaaagtcccggaggc
cattctaacagtgatgacgtggacggcaacgactactccgagcaggatacttggcaagta
cgcaatggggaggaggaggagggaagaagttcagagggaggcagagaagcagagaaggac
gacagcacgagccatagtgaccaccaagaccccatctcattagctgtggagatggcagca
gtcaaccatactatcttggcactggcccgacaaggagccaacgaaatcaagacagaggcc
ctggatgatgactga
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