Perognathus longimembris pacificus (Pacific pocket mouse): 125339260
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Entry
125339260 CDS
T08928
Symbol
Csgalnact1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop01100
Metabolic pathways
Module
plop_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125339260 (Csgalnact1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125339260 (Csgalnact1)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
125339260 (Csgalnact1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125339260 (Csgalnact1)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125339260 (Csgalnact1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
DUF4407
Tropomyosin
T2SSM
Motif
Other DBs
NCBI-GeneID:
125339260
NCBI-ProteinID:
XP_048186292
LinkDB
All DBs
Position
21:10319887..10531143
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AA seq
538 aa
AA seq
DB search
MACTPVTMVRRGLLGWISRMAVLLVLVCCAVSVLYMLACTPKGDEEQALGLPRANGPTGK
EGYQAVLQEREEQHRNYVSSLKRQIAQLKDELQARSEQLRTGQEQASEAAGLHPGPGPAP
QAQADLLAFLRAQVSKAEVQSGVKLATEYAAVPFESFTLQKVYQLETGLTRHPEEKPVRK
DKRDELVEAIESALESLNSPGESAPNQRPYTASDFIEGIYRTERDKGTLYELTFKGDHKH
EFKRLVLFRPFGPIMKVKKEKLNMASTLINIIVPLAKRVDKFRQFMQNFREMCIQQDGRI
HLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLL
FFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKE
TGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFH
LWHEKRCMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcaccccagtgaccatggtccgccgcgggctgctgggctggatctctcggatg
gcggttctcctggtgctggtctgctgcgctgtttccgtcctctacatgttggcctgcacc
cctaaaggtgacgaggagcaggccttggggctaccccgtgccaatggtcccacggggaaa
gaaggctaccaggccgtgctgcaggagcgcgaggagcagcaccgcaactatgtcagcagc
ctcaagaggcagatcgcccagctcaaggatgagctgcaggcccgcagcgagcagctccgg
accgggcaggagcaggccagcgaggccgcagggctgcaccccggcccaggccctgcaccc
caagcccaggccgacctgctggccttcctgcgtgcacaggtgagcaaagccgaggtgcag
agcggcgtgaagctggccacggagtacgcggcggtgcccttcgagagcttcaccctgcag
aaggtgtaccagctggagaccggcctgacccgccaccccgaggagaagcccgtgaggaag
gacaagcgcgacgagctggtggaagccatcgagtcggccctggagagcctcaacagccct
ggggagagcgccccaaaccagcggccttacaccgcctcggacttcatagaaggcatctac
cgaacagaaagagacaaagggactttgtacgagctcaccttcaaaggggaccataaacac
gaatttaaacgactcgtcttgtttcggccctttggacctatcatgaaagtgaagaaagaa
aaactcaacatggccagcacacttatcaacattattgtaccgctggccaagagggtggac
aagtttcggcagttcatgcagaacttcagggagatgtgcatccagcaagatgggaggatt
catctcacagttgtttactttgggaaagaagaaatgaatgaagtaaagggaatcctggag
aacacatccaaagccgccaacttccgcaacttcaccttcatccagctcaatggagaattc
tcccgggggaagggcctggatgtcggagcccgcttctggaaagggagcaacgtccttctg
tttttctgtgacgtggacatctacttcacctccgagttcctcaacacgtgcaggctgaac
acacagccagggaagaaggtgttttacccagtgcttttcagtcagtacaaccctggcatc
atctacggccatcacgacgcggtgcccccccttgagcagcagctggtcataaagaaggaa
actggattttggagggacttcggattcgggatgacttgtcagtaccggtcagacttcatc
aacataggtgggttcgacttggatatcaagggctggggcggagaggacgtgcatctctac
cgcaagtacctccacagcaacctcatcgtggtgcgcacgcccgtgcggggactcttccac
ctgtggcacgagaagcgctgcatggacgagctgacccctgagcagtacaagatgtgcatg
cagtccaaggccatgaacgaggcttcccacgggcagctggggatgctcgtcttccggcac
gagatagaggctcacctgcgcaaacagaagcagaagacgagcagcaagaaaacatga
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