Perognathus longimembris pacificus (Pacific pocket mouse): 125339288
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Entry
125339288 CDS
T08928
Symbol
Arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125339288 (Arhgef10)
03036 Chromosome and associated proteins [BR:
plop03036
]
125339288 (Arhgef10)
Membrane trafficking [BR:
plop04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125339288 (Arhgef10)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125339288 (Arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
DUF6059
Motif
Other DBs
NCBI-GeneID:
125339288
NCBI-ProteinID:
XP_048186344
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All DBs
Position
21:797215..859699
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AA seq
1343 aa
AA seq
DB search
MDQRELLPPAPTENEVKYDPNNNEEEEGEQFDFDSGDEVPEADRQALSAPEAGGAETGGA
AVPSEGEETVTVAGPATIAVPPKVNPYSVIDITPFQEAQPSTPDSHVEEEEVGLHVPSGY
SVPVPCGYAVPSSLPLLLPPAYSSPVIIRTESVEEEAETPEVTEDGQFTSVSSEGPAHSG
DHGNREGSALAQWAADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDDGGNS
SLEYGWSSSEFESYEEQSDSECKNGIPRSFLRGSHKKQLSHDLTRLKAHCEEKMRGLMAS
TVGAVEVRRPRRRRERKMQKLMKAAKEGTRDGLEKTKAAVKRGRSFIRTKSFIPQDHRSC
LEEDQNVFIEVDCKHPEAILTPMPEGLSQQQVVRRYILGSVVESEKNYADALRRLLEQYE
KPLSEMEPRILSERKLKMVFYRVKEILQCHSMFQIALASRVSEWDAVETIGDVFVASFSK
SMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQSQECSPDRATLYSLMMKPIQRFP
QIILLLQDMLKNTSKGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINER
YLNKLLGSGSRYLIRSDDVIETVYNDRGEIIKTKERRLFMLNDVLMCATVSSRTLHENHI
VTSQRYLLKWSVPLGHVTVIEYGSNPSTGEHSRYPSVHSPESLAVVANAKPHKVYLGPGQ
LYQDLQDLLHDLNVVGQIAQLIGNLKGNYQNLNQSLAHDWTSGLQRLILKKEDEIRAADR
CRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWINNLQMAKLALEEENHLGWFCVDDD
GNQTKKETHPLLVGHMPVIVAKQPEFKIECAAYNPEPYISNDSQPDSFSVARGFLWIGSC
SSQMGQIAIVSFHNSNPKVIECFNVESRILCMVYIPVEQPPEHRASPNSEATATRPSDVP
TICLGTEEGSISIYKSSQGSKKVRLQHFFTPEKSTVMSLACSPQGLYAGLVNGSVVSYTK
AADGSWNAEPQKVIKLGVLPVRSLLLMEDTLWAASGGQVFMISLENHAIENQLEAHQEEG
MVISHMAVAGVGIWIAFTSGSTLRLFHTETLKHLQDINIAAPVHSLLPGTGHQRLSVTSL
LVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGMVSYHAHHGPVKFIVMATASHQRDKD
RARDGPAPGLEAQDEDQNALPDEGPTPYPSQGGPDTATAVWLGESPGLVTQKSDLSSSSG
SLSLSHGSGSLEHRSEDSSACDLLRDAATSLRSGVQWSKKAKASSALVVCGGQGHRRVHR
KSRQPQEELVSSVMVWQIPLLSA
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagagagctgctccctcctgctcccacagaaaatgaagtgaaatatgatcct
aataacaatgaagaggaagagggagaacagttcgattttgacagtggagatgaagttcca
gaagctgatcggcaggccctgtctgcccctgaggctggaggagcagaaacaggaggagct
gctgttccctcagaaggtgaagagactgtcactgtggctggaccagccacaattgctgtt
cctccgaaagtgaacccgtattctgtcattgacatcacaccattccaggaggcccagccc
tcgacccctgattcacatgtagaggaggaggaggtgggcctgcatgtgcccagtgggtac
tcagtgcctgtgccctgtggctatgctgtcccatccagcctcccactactgctgccaccg
gcctactccagccctgtcatcatccgcactgagtctgtggaggaggaagcagaaacacca
gaagtcacagaagatggccagtttacttctgtgagttctgaggggcctgcacacagtggt
gatcatggcaatcgagagggcagtgccctggcccagtgggcagccgaccccgccaacact
gcatggatggaaaatccagaggaagcaatttatgatgatgttccaagggaaaattcggat
tctgaaccagatgaaatgatttatgacgacgtggagaatggagatgatggtggaaacagt
tctttggagtatggatggagttcaagtgaatttgaaagctatgaagaacaaagtgactca
gagtgtaagaatggaattcccaggtctttcctgcgaggcagccacaaaaagcaactctct
catgacctaacccgcttaaaggcgcactgtgaggaaaagatgagaggcttgatggccagc
acggtgggagccgtggaggtgcggaggccaaggcgaaggcgggagcggaagatgcaaaag
ctaatgaaggcggccaaggagggcaccagagatgggcttgagaaaaccaaagctgctgtg
aaaagaggccgctcgttcatcaggaccaagtctttcattcctcaagatcacagatcttgt
cttgaagaagaccaaaatgtgtttatagaggttgactgtaagcacccagaggctatcctg
actcccatgcctgagggcttgtctcagcagcaggttgtaagaagatatatactaggttca
gtcgtggaaagtgaaaagaactacgcggatgctcttaggaggcttttggagcaatatgag
aagccactgtctgagatggagcctcgtattctgagtgagaggaagctgaagatggtgttt
taccgtgtcaaggagatcctgcagtgccactccatgttccagattgcccttgccagccgt
gtgtctgagtgggatgctgtggaaacaattggtgacgtgtttgtagcttcgttttccaaa
tccatggtgctggatgcgtatagcgagtatgtgaataatttcagcacggccgtggcaatc
ctcaagaaaacatgtgccactaagcctgcttttcttgaatttttaaagcagagccaggag
tgcagccctgaccgtgccaccctctacagcctcatgatgaagcccattcagcggttcccc
cagatcatcctcctgctccaggacatgttaaagaacacctccaaaggacatcctgaccga
ctgccccttcagatggcattaacagagctcgaaaccttagcagagaagttaaacgaaaga
aaaagagatgccgaccaacgctgtgagatcaaacagatagcaaaagccataaatgaaaga
tacctgaacaagctccttggcagtggaagccggtacctcattcgctctgatgatgtgata
gaaacagtttacaatgacaggggagaaattatcaagaccaaagaacgcaggctcttcatg
ttgaatgatgtactgatgtgtgccactgtcagctcccgcaccttgcacgaaaaccacatt
gtgaccagccagaggtacctgctcaagtggagtgtccctctgggacacgtgactgtgatt
gagtacggcagcaaccccagcacaggcgagcatagccgatacccctctgtgcactctcct
gaaagcctggctgtggtggcgaacgcgaagcctcacaaagtttacttggggccaggacag
ttatatcaagatctgcaagacctgctgcatgatctcaatgtggttggtcagatcgctcag
ctaataggaaaccttaaaggaaactatcagaacttaaaccaatcattagcccatgattgg
acatcaggtttacagagactgattttgaagaaggaagatgaaattagagctgctgatcgc
tgtagaattcagttacagctcccagggaagcaggacaagtctgggagaccgacatttttt
acagctgtgttcaacacattcacccctgctatcaaagagtcctggatcaacaacttacag
atggccaagcttgccctggaggaggagaaccacctgggctggttctgtgtggatgatgat
gggaaccagactaagaaggagacgcaccctctccttgtgggacacatgcctgtgatcgtt
gccaagcagcccgagttcaagattgaatgtgctgcttacaatcccgagccttacataagt
aatgatagtcaaccagattcgttttctgtggcacgtggcttcctgtggattggaagttgt
agcagtcaaatgggccagattgccatcgtgtcatttcacaattccaaccccaaagtcatc
gaatgcttcaatgtggagtcgcgcatcctctgcatggtgtacatccccgtggagcagccc
ccggagcatcgcgcaagcccaaactctgaggccacagccaccaggccttccgacgtgccc
accatctgtctgggcacagaagaaggaagcatttccatttataaaagcagccaaggctcc
aagaaagtgagacttcagcactttttcactcctgagaagtccacagtcatgagcttggcc
tgctcaccacagggcctgtatgctggcttggtcaatgggtcggtggtcagctacaccaag
gctgcagatggatcctggaatgcagaacctcagaaagtgatcaaacttggtgtcctgcca
gtcagaagtctcctcctgatggaggacacgctgtgggcagcttctggaggccaggtgttc
atgatcagcttggagaaccatgccattgaaaaccagctggaggcccaccaggaagaaggg
atggtcatctcccacatggcagtggctggcgttgggatctggattgccttcacctcgggc
tccaccctccgtctcttccacacggaaacgctgaagcacctgcaggacatcaacattgcc
gcccctgtgcacagcctgctgccagggacaggacaccagaggctgtctgtgaccagcttg
cttgtctgccatggcttgctgatggtgggtaccagcctgggtgtggtcgtagccctgccc
gtccctcgactgcaggggatccccaaagtgacaggaagaggcatggtctcctaccatgcg
catcacggtccggtcaagttcattgtcatggccacggcttcgcatcagagggacaaagac
agagccagagatggcccagccccgggcctggaggctcaggatgaagaccagaatgctctt
ccagatgaggggcccacgccctaccctagccagggtggcccggacacagccacagctgtt
tggttgggagagtccccagggttggtgactcagaagagcgacctgtcctcctcctcaggg
tccctgagcctgtcccacggctctggctccctggagcacaggtctgaggacagcagcgcc
tgcgacctcctgagggacgctgccacctctctccggagcggggtgcagtggtccaagaag
gccaaggccagctcggccctagtggtgtgcgggggccagggccaccgccgtgtgcacagg
aagtcccggcaaccccaggaggagctggtgtcctccgtgatggtctggcagatcccgctg
ctgagcgcgtag
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