Perognathus longimembris pacificus (Pacific pocket mouse): 125339350
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Entry
125339350 CDS
T08928
Symbol
Rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125339350 (Rnf170)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125339350 (Rnf170)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125339350 (Rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-Nse
TRAF3_RING
Baculo_IE-1
TerY_C
Motif
Other DBs
NCBI-GeneID:
125339350
NCBI-ProteinID:
XP_048186449
LinkDB
All DBs
Position
21:29495374..29525994
Genome browser
AA seq
305 aa
AA seq
DB search
MGEGGCRFINAQRTATVLRACFFCCRELAWRCIIGQFSLLYIPKRPGMAKFQGEVQSLKL
DEDSVIEGVSDQVLVAVVVSFTLIATLVYALFRNVHQNIHPENQELVRVLREQLQTEQGV
PTTARQQFYTEMYCPICLHQASFPVETNCGHLFCGTCITAYWRYGSWLGAISCPICRQTV
TLLLTVFGEDDQSQDVVRLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGG
LFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVIT
QRLAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaggtggatgccggttcatcaatgcgcaaaggaccgcaactgttcttagggcc
tgtttcttctgttgtcgggagttggcttggaggtgcatcattggccagttctcactttta
tacattcctaaacgacctggaatggccaaatttcaaggtgaagttcagagtttgaaactg
gatgaagattcagttatagaaggagtaagtgaccaagtgcttgtggctgttgtggtcagt
ttcactttgattgctaccctggtatatgcacttttcagaaatgtacatcagaacattcac
ccagaaaatcaagagctagtaagggtacttcgagaacaacttcaaacagaacagggtgta
cctactactgctcgacagcagttctacactgaaatgtactgtccaatctgcttacatcaa
gcctctttccctgtggaaacgaactgtggacatcttttctgtggtacctgtattactgca
tattggagatatggttcatggcttggagcaatcagttgtccaatctgtagacaaacggtt
actctcctcctcacagtatttggtgaagatgatcagtctcaggatgttgtaagattgcat
caagatattaatgattataaccggagattctcagggcagcccagatctattatggaaaga
atcatggatcttcccactttactgagacatgcattcagagaaatgttttcagttggaggt
cttttctggatgttccgcattaggataatactttgtttaatgggagcttttttctacctt
atatcacctttagactttgtacctgaagccttgtttggaattctaggctttttagatgat
ttctttgtcatttttttgttgcttatctatatttctattatgtatcgagaagtaataaca
caaaggctagccagatga
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