Perognathus longimembris pacificus (Pacific pocket mouse): 125339500
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Entry
125339500 CDS
T08928
Name
(RefSeq) tripartite motif-containing protein 75-like
KO
K12037
tripartite motif-containing protein 75
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125339500
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125339500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-Nse
zf-rbx1
zf-RING_10
zf-RING_6
Bacillus_HBL
Baculo_IE-1
Prok-RING_4
TRAF3_RING
CDK5RAP3
FUT8_N_cat
Sina_RING
DUF5810
Motif
Other DBs
NCBI-GeneID:
125339500
NCBI-ProteinID:
XP_048186625
LinkDB
All DBs
Position
21:12470103..12471748
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AA seq
468 aa
AA seq
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MAVTAVLAKFQAESKCPVCLEDLKDPVTIECGHNFCRACIQQSWENLQEMFPCPVCRHQN
EEGHHRSNHQLGRMIKIAQQLQVGSSKRKRPEEDSQCEKHSQAFTFFCEKDLELLCPLCM
GGPGHNRHTVRPIAKAASTHREKLLSYIQPLKKQLEQARKLVQTQSKKHLELKEILENQR
KQFTSECEHLMRYLEQEQKAALCRLEEEEKEIEQKLQENIEAFTLYGSRLRSLLHQGEEQ
MRLPEVEFLQEVKHFHRNFDPEFSPPVFSSQLKPHVYLFPPQYSALQKLIRKFKVDILLD
PETAHPNLVVSQDKKCVTFSEKKQQVPNSPRRFKANTVVLGALEIGSGRHFWEVQVGDKA
KWGIGVCKASLSPKAKWTSNPEGYWRMLLLDGGYQAPGAVPKPRLDVMARRIGIFLDYEL
GELSFYNMPEKSHICTFWETFTKPLKPCFYMGPKSEPLRITTEADCPQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacagcagtcttggctaaattccaagctgaatctaagtgccccgtctgcctg
gaagacctgaaagacccagtgaccatcgagtgtggacacaacttctgccgtgcctgcatc
cagcagtcctgggagaatctgcaggagatgttcccctgccctgtgtgccgccaccagaac
gaggaggggcatcacagaagcaatcaccagctggggaggatgatcaaaatcgcccagcag
ctccaagtcggcagcagcaagaggaagaggccggaagaggactcccagtgtgagaagcac
agccaggccttcaccttcttctgtgagaaggatttggagctgctgtgtcctttgtgcatg
gggggcccgggccacaatcgccacacagtgaggcccatcgccaaggccgcctctacccac
agggaaaagctcctctcgtatatccagcctctgaagaaacagctggaacaggcccgcaaa
ctagtacagacccaaagcaaaaaacatctggaactcaaagagatcctggagaaccagagg
aagcaattcacctcggaatgtgagcatctgatgcgctatttagagcaggagcagaaggca
gctctgtgtaggttagaagaagaggagaaggagatagaacagaaactccaggaaaacatc
gaggcctttaccctctatggttccagactccgaagtctcctgcaccagggggaagagcag
atgaggctgccggaagtggaatttctacaggaagtcaaacatttccacaggaatttcgac
cctgagtttagcccacctgtcttttcaagtcagttaaagccccacgtctaccttttcccc
ccccagtattctgccctgcaaaagctgataaggaaattcaaggtggacatccttctagac
cctgagacggctcatccgaatttggttgtctcccaggataaaaaatgtgtgacattttca
gagaagaaacaacaagtgcccaattctccaagaaggttcaaagccaacaccgtggttctc
ggggctctggagattggatctgggaggcatttctgggaggttcaagtaggagacaaggct
aagtggggtatcggagtctgcaaggcctctttgtccccaaaagcaaagtggacatccaac
cccgagggatactggaggatgctgctactggacggtggctaccaggctcccggagctgtt
cccaaacctcggttagatgtgatggccagacgcatcggcattttcctggactatgagctg
ggggagctctccttctataacatgcccgagaaatcgcacatctgcactttctgggagacg
ttcacaaagcctcttaagccctgtttctatatgggacctaagtcagaacctctccgcatc
acgacagaagcggattgcccgcagtga
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