Perognathus longimembris pacificus (Pacific pocket mouse): 125339538
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Entry
125339538 CDS
T08928
Symbol
Msr1
Name
(RefSeq) macrophage scavenger receptor types I and II
KO
K06558
macrophage scavenger receptor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125339538 (Msr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125339538 (Msr1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
plop04090
]
125339538 (Msr1)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Scavenger receptors
125339538 (Msr1)
CD molecules [BR:
plop04090
]
Proteins
125339538 (Msr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macscav_rec
Collagen
DUF2371
NET2A_C
Motif
Other DBs
NCBI-GeneID:
125339538
NCBI-ProteinID:
XP_048186690
LinkDB
All DBs
Position
21:complement(44180039..44213368)
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AA seq
341 aa
AA seq
DB search
MEHQNLFHDQQEDNDSFSEPVKFDARSMRALLSPKPKNVPALHEKLKCFKAALITLYLLV
FAVLIPIIGIMAAHLLKWDTKNCLVDSSQSAMRKGNDSEEEMRLQEVVTKHLNNTEERIQ
HILDIEANLIDEESFQNFSIKTDQRFDGFLLQLSALVTSVQEHGNTIDGISKSLISLNAT
LLETQLRVESLNSKLEEFTLKQQEEIRKLEEHMYNASAEIESMKEEQALVEGEMKREVKV
LNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGLIGLTGHPGLMGLRGPPGEKG
DRGFPGSKGFPGPPGRTGRTGNPGSKGQKGEKGSYIGHLYS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcagaatctatttcatgaccaacaggaggacaatgacagcttttccgaacct
gtgaaattcgatgctcgctcaatgagggctttgctctctcccaaacctaaaaatgtccct
gctcttcacgagaagttgaagtgcttcaaagctgcactaattaccctctatctcctcgtg
tttgctgtcctcatacctatcattggaataatggcagctcatctcttaaagtgggacaca
aagaattgccttgttgattcatctcaaagtgcaatgagaaaaggaaatgacagtgaagag
gaaatgagacttcaagaagttgtgacaaaacacctgaacaacacggaggagagaatccaa
catattttagacatagaagccaatctcatagatgaagaatctttccagaatttcagcata
aagactgatcaaagatttgatggttttctcctccaactaagtgctttggttacctcagtt
caggaacatgggaatacaatagatggaatctcaaagtccttaataagcttgaatgctacc
ttgcttgagacgcagctccgtgtagaatcattgaatagtaaactcgaagagtttaccttg
aagcagcaagaggaaatccgtaagttagaagagcacatgtataatgcgtcagcagaaatt
gagtctatgaaagaagaacaagcacttgtggaaggggaaatgaagagagaagtgaaagta
ctgaataacatcactaacgacctcaggctgaaggactgggagcattctcagacactgaga
aatatcactttgattcaaggtcctccaggacctccaggggaaaaaggtgacagaggactc
attggactaactggtcatccaggcctgatgggcctgagaggtcctccaggtgaaaaaggt
gaccgtggctttcctggaagtaaaggattcccaggaccaccaggaaggacaggacggaca
ggaaatcctggatcaaaaggacaaaagggagaaaagggaagctacataggtcatctttac
tcctga
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