Perognathus longimembris pacificus (Pacific pocket mouse): 125339605
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Entry
125339605 CDS
T08928
Symbol
Cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125339605 (Cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125339605 (Cnot7)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125339605 (Cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125339605 (Cnot7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
125339605
NCBI-ProteinID:
XP_048186765
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All DBs
Position
21:complement(44847555..44866595)
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AA seq
285 aa
AA seq
DB search
MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD
FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagcaactgtagatcatagccaaagaatttgtgaagtttgggcttgtaacctg
gatgaagagatgaagaaaatccgtcaagttatccgaaaatataattatgttgctatggac
actgagtttccaggtgtggttgcaagacccattggagaattcagaagcaatgctgactat
cagtaccaactattgcggtgtaatgtagacttgttaaagataattcagctaggactgaca
tttatgaatgagcaaggagaataccctccaggaacttcaacttggcagtttaattttaaa
tttaatttgacggaagacatgtatgctcaggattctatagagctactaacaacatcaggt
atccagtttaaaaaacatgaagaggaaggaattgagacccaatactttgcagaacttctc
atgacttcaggagtggtcctctgtgaaggggtcaaatggttatcatttcatagcggttat
gactttggctatttaatcaaaatcctgaccaactctaacttgcctgaagaagaacttgac
ttctttgagatacttcgattgttttttcctgtcatttatgatgtgaaatacctcatgaag
agctgcaaaaatctcaaaggtggattacaggaagttgctgaacagttagagctggaaagg
ataggaccacaacatcaggcaggatctgattcattacttacaggaatggcctttttcaaa
atgagagaaatgttctttgaagatcacattgatgatgccaaatattgtggtcatttgtat
ggcctcggttctggttcatcctatgtacagaatggcacggggaatgcatatgaagaggaa
gccaacaagcagtcatga
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