Perognathus longimembris pacificus (Pacific pocket mouse): 125339608
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Entry
125339608 CDS
T08928
Symbol
Nefl
Name
(RefSeq) neurofilament light polypeptide
KO
K04572
neurofilament light polypeptide
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05014
Amyotrophic lateral sclerosis
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125339608 (Nefl)
05022 Pathways of neurodegeneration - multiple diseases
125339608 (Nefl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125339608 (Nefl)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125339608 (Nefl)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125339608 (Nefl)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
125339608 (Nefl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TPR_MLP1_2
DUF1664
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
125339608
NCBI-ProteinID:
XP_048186772
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All DBs
Position
21:7089250..7092905
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AA seq
543 aa
AA seq
DB search
MSSFGYEPYYSSSYKRRYAEPPRVHIASVRSGYSAARSAYSSYSAPVSSSLSVRRSYSSS
SGSLMPSLENLDLSQVAAISNDLKSIRTQEKAQLQDLNDRFASFIERVHELEQQNKVLEA
ELLVLRQKHSEPSRFRALYEQEIRDLRLAAEDATTEKQALQGEREGLEETLRTLQARYEE
EVLSREDAEGRLMEARKGADEAALARAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQY
AQISVEMDVSSKPDLSAALKDIRAQYEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVR
AAKDEVSESRRLLKAKTLEIEACRGMNEALEKQLQELEDKQNADISAMQDTINKLENELR
TTKSEMARYLKEYQDLLNVKMALDIEIAAYRKLLEGEETRLSFTSVGSITGGYSQSSQVF
GRSAYGGLQTSSYLMSARSFPSYYTSHVQEEQIEVEETIEATKAEEAKDEPPSEGEAEEE
EKEKEDAEEEEGGEEEEAKEGSEDAKEEEEGGGDGEEEDTKESEEDEKKEEGAGEEQATK
KKD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagttccttcggctatgagccgtactactcgagctcgtacaagcggcgctacgcggag
ccgccccgggtccacatcgccagcgtgcgcagcggctacagcgcggcgcgctccgcgtac
tccagctactcggcgcccgtctcctcctcgctgtcggtgcgccgcagctactcctccagc
tccgggtcgctgatgcccagcctggagaacctcgacctgagtcaggtggcggccatcagc
aacgacctcaagtccatccgcacgcaggagaaggcgcagctgcaggacctcaacgaccgc
ttcgccagcttcatcgagcgcgtgcacgagctggagcagcagaacaaggtgctggaggcc
gagctgctggtgctgcgccagaagcactcggagccgtcccgcttccgcgcgctgtacgag
caggagatccgcgacctgcgcctggcggccgaggacgccacgaccgagaagcaggcgctg
cagggcgagcgcgaggggctggaggagacgctgcgcacgctgcaggcgcgctacgaggag
gaggtgctgagccgcgaggacgccgagggccgcctcatggaggcgcgcaagggcgccgac
gaggccgcgctcgcgcgcgccgagctggagaagcgcatcgacagcctcatggacgagatc
gccttcctcaagaaggtgcacgaggaggagatcgccgagctgcaggcccagatccagtac
gcgcagatctccgtggagatggacgtgtcctccaagcccgacctctccgccgcgctcaag
gacatccgcgcgcagtacgagaagctggccgccaagaacatgcagaacgccgaggagtgg
ttcaagagccgcttcaccgtgctcaccgagagcgccgccaagaacaccgacgccgtgcgc
gccgccaaggacgaggtgtccgagagccgccgcctgctcaaggccaagaccctggagatc
gaggcctgccggggcatgaacgaggcgctcgagaagcagctgcaggagctggaggataag
cagaacgccgacatcagtgccatgcaggacacgatcaacaaattggaaaacgagctccga
accacaaagagtgaaatggcaagatacctgaaagaatatcaggacctcctgaacgtgaag
atggccctggacattgagattgcagcttacaggaaacttctggaaggtgaggagacacgg
ctcagcttcaccagtgtgggcagcatcaccggcggctactcccagagctcccaggtcttc
ggccgctctgcctacggtggtctgcagaccagctcctacctgatgtccgcccgctccttc
ccttcctactacaccagccacgtccaggaagagcagatcgaagtggaggagaccatcgag
gccaccaaagctgaggaagccaaggacgagcccccctcggaaggggaagcagaagaggag
gagaaggagaaggaagacgccgaggaagaggagggaggggaagaggaagaagccaaggaa
ggatctgaagatgcaaaggaggaagaagaaggaggaggtgatggcgaagaagaagacacc
aaagaatcggaagaggatgagaagaaggaggaaggtgctggagaggaacaagcaacaaag
aagaaagattga
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