Perognathus longimembris pacificus (Pacific pocket mouse): 125339628
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Entry
125339628 CDS
T08928
Symbol
Chrna2
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125339628 (Chrna2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125339628 (Chrna2)
Ion channels [BR:
plop04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125339628 (Chrna2)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SDA1_dom
BUD22
CPSF100_C
Radial_spoke
Tim54
Nop52
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
125339628
NCBI-ProteinID:
XP_048186796
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Position
21:5822300..5835545
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AA seq
525 aa
AA seq
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MAPFCPALQSLVLWLLVIPAVLAQQGPHTLAEDRLFKHLFGGYNRWARPVPNTSDVVIVR
FGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWNPADFGNITSLRVPSEMIWIPDIVL
YNNADGEFTVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYD
KAKIDLEQMEQTVDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDITYAFVIRRLPLF
YTVNLIVPCLLISCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMVFVTLSIVVTVFVLNVHHRSPSTHTMPGWVRGALLGRLPRWLLMGRPPPAA
EIPQPRDPKLRPSYHWLESDVDADEREETEEEEEEEEEEEEEEEEEEEEEEEEEEDRWAC
AGFPPPSMGILYSHEGLHMGVPGPEAEAVSPPAGELFLSPQIREALEGMHYIADHLRAED
ADSMVKEDWKYVAMVIDRIFLWLFIIVSFLGTVGLFLPPFLAGMI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcccctttctgtcctgcactccagtccctggtgctgtggctacttgtgatacctgca
gtgttggcacagcaaggcccccacaccctggccgaggaccgcctcttcaaacacctcttt
ggaggctacaaccgttgggcgaggcccgtgcccaacacttccgatgtggtcattgtgcgc
tttggactgtccatcgctcagctcattgatgtggatgaaaagaaccaaatgatgaccacc
aacgtgtggctgaagcaggagtggaatgactacaagctgcgctggaaccccgctgacttt
ggcaacatcacctccctccgggtgccttcggagatgatctggatccccgacattgtcctc
tacaacaatgcagacggagagtttacggtgacccacatgaccaaggcccacctcttctcc
acgggcaccgtgcactgggtgccgccggccatctacaagagctcctgcagcatcgacgtc
accttcttccccttcgaccagcagaactgcaagatgaagttcggctcctggacctacgac
aaggccaagatcgacctggagcagatggagcagacggtggacctgaaggactactgggag
agcggcgagtgggccatcgtcaacgccacgggcacctacaacagcaagaagtacgactgc
tgcgcggagatctaccccgacatcacgtacgccttcgtcatccgccgcctgccgctcttc
tacaccgtcaacctcatcgtgccctgcctgctcatctcgtgcctcaccgtgctggtgttc
tacctgccctccgagtgcggcgagaaggtcacgctctgcatctccgtgctgctctcgctc
accgtcttcctgctgctcatcaccgagatcatcccgtccacctcgctcgtcatcccgctc
atcggcgagtacctgctcttcaccatggtcttcgtcaccctctccatcgtcgtcaccgtc
ttcgtgctcaacgtgcaccaccgctcgcccagcacccacaccatgccgggctgggtgcgg
ggggcgctgctcggccgcctgccccgctggctgctcatgggccggcccccacccgcggcg
gagatcccgcagccccgggacccgaagctcaggccttcctatcactggctggagagcgac
gtggatgcggacgagagggaagagacggaggaggaggaggaggaggaggaggaggaggag
gaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggacagatgggcgtgt
gcgggcttcccacccccctcgatggggatcctctactcgcacgagggcctgcacatggga
gtgccggggcccgaggccgaggccgtgtcccccccagccggtgagctcttcctgtcacct
cagattcgcgaggcactggaaggcatgcactacattgctgaccacctgcgggcggaggat
gccgactcgatggtgaaggaagactggaagtatgtggccatggtcatcgacaggatattc
ctctggttgtttatcatcgtctccttcctaggaacagttgggctctttcttcctccgttc
ttggctggaatgatctga
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