KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125339805
Entry
125339805         CDS       T08928                                 
Symbol
Kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04714  Thermogenesis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    125339805 (Kdm3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125339805 (Kdm3b)
Enzymes [BR:plop01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     125339805 (Kdm3b)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125339805 (Kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 125339805
NCBI-ProteinID: XP_048187017
LinkDB
Position
22:complement(9363209..9437041)
AA seq 1763 aa
MADAAASPVGKRLLLLFADTAASAPAPVAAAVACGGDPGPALRTRAWRAGTVRAMSGAVP
QDLAIFVEFDGCNWKQHSWVKVHAEEVIVLLLEGSLVWAPRKDPVLLEGTRVSNAQWPAL
TFTPLVDKLGLGSVVPVEYLLDRELRFLSDANGLHLFQMGTDSQNQILLEHAALRETVNA
LISDQKLQEIFSRGPYSVQGHRVKIYQPEGEECWIYGVVSHQDSITRLMEVSITESGEIK
SVDPRLIHVMLMDNATSHTEGGTLKAVKSSKGKKKRESIEGKDGRRRKSASDSGCDPASK
KLKGDRGEVDSNGSDGGEASRGAWKGGNTSGEPGTEQRAKQPPSTFVPQINRNIRFATYT
KENGRTLVVQDEPVGGEAPVPFTPYSTAAGQAPLAPEVGGTENQEAGKTLEPVGQGVVAA
AGVVTTANSTPTTVRISDTGLAAGTGPEKQKGSWSQAAGENSRNSLLASSGFGVSLPSLS
QPLTFGSGRSPSNGVIATENKPLGFSFGCSSSVPESQKDSDLSKNLFFQCMSQTLPTSNY
FTTVSESLADDSSSRDSFKQSLESLSSGLCKGRSALGADAKAGCKAGSSVDRKVPAESMP
TLTPAFPRSLQTTRTPENHENLFLQPPKLSREEPSNPFLAFVEKVEHSPFSSFASQASGS
SSATTVTSKAPPSWPESHSSTDSASLAKKKTLFITTDSSKLVPGVLGSTITTGGPSLSAM
GNGRSSSPTSNLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLKTFSNIFGRHSGGFLSSP
ADFSQENKAPFEAVKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQIQAKTGLKGIPEH
LMGKLGPNGERSAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDVSKVKKLKQSGEPFLQ
DGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLS
PQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAW
KRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKSRPRSETEEMGDEEVFSWL
KCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCISRQNKSVLRPAVT
NGMSQLPSINPSASSGNETTFSGGGGGTTAVTAPEPDHVPKADSTDIRSEELLKADGSAS
NSNSELKAIRAPCPDTAPPSSALHWLADLATQKAKEETKEAGSLRSVLNKESHSPFGLDS
FNSTAKVSPLTPKLFNSLLLGPTASNNKTEGSSLRDLLHSGPGKLPQTPLDTGIPFPPVF
STSSAQGAKNKASLPNFLDHIIASVVENKKTSDASKRACNLTDTQKEVKEMVMGLNVLDP
HTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEF
GDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMM
PTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTN
LHLDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDVDEVTKQRIHDGKEKPGALWHIYA
AKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLG
DAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKN
IIYHAVKDAVGTLKAHESKLARS
NT seq 5292 nt   +upstreamnt  +downstreamnt
atggcggacgcggcggcctccccggtgggcaagcgtctgctgcttctgttcgcggacacc
gcggcctcggctccggcccccgtggcggcagcggtggcgtgtggaggagatccagggcct
gcgctgcgcactcgggcctggcgggccggcacggtgcgggccatgagcggggcggtgccc
caggacctagcgatctttgtagaatttgatggttgtaactggaagcaacactcctgggtt
aaagttcatgctgaagaagttattgtgcttctcctggaagggtcgcttgtatgggcacca
cggaaagacccagttcttcttgaaggcactcgagtgtcaaatgcacagtggccagctctg
actttcactcccttagtagataaattgggtttgggttctgtggtgccagtagaatacctt
ttggatcgagagcttcgtttcctgtcagatgctaatggattgcatctgttccagatggga
acagatagccaaaaccagatccttttagaacacgctgcactgagagaaacagttaatgct
ttgatcagtgaccaaaagctacaagagatattcagccgaggtccctacagtgttcaaggt
cacagggtcaaaatataccagccagagggtgaagaatgctggatctacggtgttgtaagc
catcaggattcaatcacccgtcttatggaggtatctataacagagagtggtgaaatcaag
tcagtagatcctagacttatccatgtgatgttaatggataacgcaacgtctcacaccgag
gggggtacgttaaaagcagtaaaatcttccaaaggaaaaaagaagagagagagcatagag
gggaaagatggccggaggaggaaaagtgcttcggactctgggtgtgaccctgcatcaaag
aaattgaaaggagacaggggtgaagtagacagtaatgggagcgatggaggtgaggcaagc
cgaggggcctggaaaggaggtaataccagtggagagccagggacggagcagagagccaag
caaccaccgtctacatttgttccccagattaatcgcaacattcgctttgctacttacacc
aaagaaaacggcaggactctggtggtgcaggatgagcctgtaggcggggaggcacctgta
cctttcactccatattctacagctgcaggtcaggcacctttggctccagaggtgggtgga
actgaaaaccaagaggcaggaaaaacactggaaccagttggccagggagtggtggctgct
gcaggtgtggtcactactgccaactccaccccaaccacggtgaggatttcagacactggc
cttgcagcagggactgggccggaaaaacagaaaggcagctggtcgcaggcggcaggagag
aattcaagaaattctcttctggcctcttctggatttggagtgtctcttccaagtttgtca
caaccattgacttttggaagtgggaggagtccgtctaatggagttatagccacagagaat
aaacctttgggcttttcttttggttgtagctcttctgtaccagagtctcagaaagactct
gatctctccaaaaacttgttttttcaatgtatgtcccaaactttacccaccagtaactac
ttcactacggtttcagagagtctggctgatgattcctctagccgggattcattcaaacaa
agccttgaaagcttgagctcgggcctgtgtaagggtaggtctgctcttggagcagacgct
aaggcaggctgtaaagctggcagctctgtggaccgcaaagtgcctgcagagtccatgccc
actctcactccagccttcccacggagcctccaaaccacccgcaccccagagaaccatgaa
aatctatttttacagccacccaaactgtcccgagaagaaccttctaaccctttcctggca
tttgtggaaaaagttgaacatagcccttttagcagctttgcgtctcaggcctcaggaagc
tcttctgcgaccacggtcacctccaaggcaccacccagctggccggagtctcattcctcc
acagattcagcatctttagcaaagaagaaaactctcttcattaccactgactcctccaag
ttggtgcctggtgttctgggctcaaccattaccactgggggtccaagcctctctgccatg
gggaatggccgctccagctcgcccaccagcaacctcacccagcccattgagatgcctact
ctctcctccagtcccacagaagagaggccgactgtggggcctgggcagcaggacaatccc
ctcctcaaaacctttagtaacatctttggcaggcactcaggcggctttctttcctcccca
gcagatttttcacaggagaacaaagctccttttgaagctgtgaaaaggttctcactggat
gagcgaagcttggcttgtagacaggactcggactccagcaccaacagtgacctgtcagat
ttgagcgactcagaggaacagattcaggccaagactggcctgaaggggattccggagcac
ctgatgggaaagttgggccccaatggggagcgcagtgctgagctgttgctgggcaagggc
aaagggaagcaggctccgaagggccggcctcggactgctcccttgaaagttggccagtca
gtgctgaaagatgtaagcaaagtgaagaagctgaagcagtctggagagcctttccttcaa
gatggatcatgcatcaatgtggcacctcatctgcacaaatgtcgggagtgccgcctggag
cggtatcggaagtttaaggaacaagaacaagatgattctactgtagcctgccgcttcttt
cactttcggaggttgatcttcacccgaaaaggagtacttcgtgtggaggggtttctaagc
cctcagcaaagtgaccctgatgctatgaacctgtggattccttcttcctctctagcagaa
gggatagacctagaaacctcaaaatacatccttgccaatgttggggaccagttctgtcag
ctcgtaatgtccgagaaggaggccatgatgatggtagaaccacatcagaaagtggcatgg
aagcgagctgtgcgtggtgttcgggaaatgtgtgatgtatgtgaaacaactctcttcaat
atccactgggtttgccgcaaatgtggatttggagtctgccttgactgttacaggctcagg
aaaagccgtccacgcagtgagacagaggaaatgggtgatgaagaggttttctcctggtta
aaatgtgcaaaggggcagtcccatgagccagagaacctcatgcccacacaaatcatccct
ggtacagctctttacaacattggagacatggtacatgctgctcgaggcaagtggggaatt
aaagcaaactgcccttgtattagtcggcaaaacaaatctgtgttgagacctgctgtcacc
aatgggatgtcacagcttcctagcataaaccctagtgcctcttctggaaatgaaactacc
ttctcaggaggaggaggaggaactacagcagtaacagcaccagagcccgaccatgttccc
aaagccgacagcactgacatcagatcagaagagctcctgaaagcagatggttcagcatca
aatagcaatagtgagctaaaagccatcagggccccgtgcccggacactgctcctccttcc
tctgccctgcattggttggcagatttagcaactcaaaaggctaaagaagaaacaaaagaa
gcagggtccctgaggtcggtgctcaataaagagtctcattcaccctttgggctggactca
ttcaactccactgcaaaagtctctccattgactccaaagctttttaacagtctgttactc
ggtcctactgcctccaacaacaaaactgagggctctagcctccgagacctccttcactcc
gggcctggaaagcttcctcaaacccccttggacacaggcatacccttccccccggtcttc
tctacatcctcagcacagggtgcgaagaacaaggccagtctaccaaactttcttgaccac
ataattgcctcggtggtagaaaataagaaaacctcagatgcttcaaagcgggcctgcaac
ttgactgacacccaaaaggaagtaaaggaaatggtgatggggttgaatgtactggacccc
catacttctcactcctggctttgtgatgggaggcttctgtgtctccatgaccccagcaac
aaaaacaattggaagattttccgagagtgttggaagcaaggtcagccagtgctggtatca
ggagtacataaaaagctcaagtctgaactctggaagccagaagcctttagccaggaattt
ggagaccaggatgtagacttggtgaactgcaggaactgtgcaataatttctgatgtaaaa
gttcgggatttctgggatggctttgagatcatatgcaagcgactaaggtcagaagatggg
cagccaatggtgctcaaactcaaagactggcctcctggggaagattttcgggacatgatg
ccaacaaggtttgaagatctgatggagaaccttcctttgccagaatataccaaacgagat
ggcaggctcaacctggcctctaggctacccagctactttgtaaggcctgatctaggcccc
aagatgtacaacgcctatggattgataacagcagaagatagaagagttggcacaacaaat
ctccacttggatgtgtctgatgctgttaatgtgatggtgtatgttgggatccccatcggg
gagggtgctcatgatgaagaggtactcaagacaattgatgagggagatgttgatgaggtg
acaaagcagaggattcatgatggaaaggagaagccaggtgctttgtggcacatctatgca
gccaaggacgcagagaagatccgggagcttctccgaaaggttggagaagagcaaggccaa
gagaatccccctgatcatgacccaattcatgaccaaagttggtacctggatcagaccctc
cgcaagcgactctatgacgagtatggagtgcaaggctgggccattgtacagttcctcggt
gacgctgtcttcatacctgccggagccccacaccaggttcataatctgtatagttgcata
aaagtagcagaagactttgtatctccagaacacgtgaagcactgttttcgcctgactcag
gaattcaggcatctctccaatactcataccaatcatgaggataaactgcaggtaaagaac
atcatctaccacgcggtgaaggatgctgttggtaccctcaaggcccatgagtccaaactg
gcaaggtcttag

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