Perognathus longimembris pacificus (Pacific pocket mouse): 125339880
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Entry
125339880 CDS
T08928
Name
(RefSeq) protocadherin beta-2-like isoform X1
KO
K16494
protocadherin beta
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125339880
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Protocadherins
125339880
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
125339880
NCBI-ProteinID:
XP_048187163
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Position
22:complement(7252858..7260876)
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AA seq
797 aa
AA seq
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MENEKELYRKQRQVLIFFVLLGIAQAGSEPTLYSVAEETESGSFVANLLTDLGLEVEELA
SRGARLVSKGKNLHLHLDRQTGDLLVNEKLDREELCGSTEPCVLPFQVLLENPLQFFLGQ
LWVKDINDHSPVFLDNEIILKIPESIAPGTTFLIERAQDLDVGSNSLQNYTLSPNFYFHL
KLQDSPDGILPQLVLEKALDREEEPEIRLILTALDGGNPPRSCTALVRIEVVDINDNAPE
FTKLLYEVQVPENSPVGFQVATVSARDLDSGINGEIAYTFSQASEDIRKTFRVNAKSGEL
LLARTLDYESIQTYTVNIQATDGGGLTGGCVVFVQVLDLNDNPPELSISTLTNEVPENLM
EALIAVFSVSDPDSGDNGRLACSIPDDLPFLLTPSVENFYTIRTRSALDREEREEYNITI
TVTDAGSPRLRTQHTLAVRVADENDNAPEFTQACYTLRVRENNSPALALGSVRATDRDAG
SNAQLSYSLLAGPQPGPDAAALVSIDADSGQLFALRPLDYEALPAFELRVRAADRGAPPR
SSQARVRVQVLDANDHAPRVLYPPQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQNAW
LSFRLLQATEPGLWGVAPHNGEVRTARPLSERDAPRHRLLLLVQDHGEPPRSASVALHVL
LVDGFSQAHLPPPAAPPERAQPDRLAASLLVALAALAALGLAALLLFVAGRLCRRRGARS
RGGCALPDPPFPARLLDAGPAGTLARGGRHLGALRGATGATEVNSLKPIFPNLSPQIPGN
EIEGAPSFRNSLGFSIQ
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaaaggagctctatcggaaacaaaggcaagtcctgatattctttgtttta
ctgggcatagctcaggctggttctgaacctacgctctattcagtggctgaggaaacagag
agtggctcctttgtggccaatttgttaacggacctggggctggaggtggaagagctagct
tccaggggtgctcggctggtgtctaaagggaaaaacctgcatttgcatttggataggcaa
accggggacttgctggtaaatgagaaactggaccgcgaggagctctgcggttctaccgag
ccctgtgtactacctttccaggtgctactggaaaaccctctgcagtttttcctgggccag
ttgtgggttaaggacataaatgatcattccccggttttcttagacaacgaaataattttg
aaaattccagaaagtattgctcctggaactactttcctaatagaacgtgcccaggatctg
gatgtaggaagcaacagtctccaaaattacacactcagccccaatttctattttcatctg
aaattacaagatagccctgatggcatattaccacagctggtgctggagaaagcgctggat
cgggaggaggagccggagatcaggctaatcctcactgccctggacggtgggaatccaccc
aggtcctgcactgccctggtccgtattgaagttgtggatatcaatgacaacgccccggag
ttcacaaagcttctctacgaggtgcaggtcccagagaacagccccgttggattccaggtt
gccactgtctcggctagggacttggacagtggtattaatggagaaatagcgtacacgttt
tctcaagcctctgaagacatccggaaaacattccgcgtcaatgcaaaatccggagaactg
cttttagcacggaccttggattatgaatccattcagacttacacagtaaatatccaggca
acagacggtgggggacttactggaggttgcgtggtgtttgtccaagtgctggatttgaat
gacaacccgccggaactgagcatctccacgctgaccaacgaggtcccagaaaacctgatg
gaagccctgattgctgtattcagtgtttcggatcctgactcgggagacaatgggaggctg
gcgtgctccatcccggacgacctgcctttccttctgacaccctccgtggaaaacttttac
acaatccggacacgctcagcgctggaccgggaggagagagaggagtacaacatcaccatc
accgtgacggacgcggggagcccccggctgcgcacgcagcacacgctcgccgtgcgcgtg
gccgacgagaacgacaacgccccggagttcacgcaggcctgctacacgctgcgcgtgcgc
gagaacaacagccccgccctggccctgggcagcgtgcgcgccaccgacagggacgcgggc
agcaacgcgcagctgagctactcgctgctggccgggccgcagcccgggcccgacgcggcg
gcgctcgtgtccatcgacgccgacagcgggcagctgttcgccctgaggccgctggactac
gaggccctgccggcgttcgagctgcgcgtgcgcgccgccgaccgaggcgcgcccccgcgc
agcagccaggcgcgggtgcgcgtgcaggtgctggacgccaacgaccacgcgccccgggtg
ctgtacccgccgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcggccgag
ccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaacgcctgg
ctgtcgttccggctgctgcaggccacggagcccgggctgtggggcgtggcgccgcacaat
ggcgaggtgcgcaccgcgcggccgctgagcgagcgcgacgcgccccgccaccggctgctg
ctgctggtgcaggaccatggcgagccgccgcgctcggccagcgtggcgctgcacgtgctg
ctggtcgacggcttctcgcaggcccacctgccgccgcccgccgcgccgcccgagcgcgcg
cagcccgaccgcctggccgcctcgctgctcgtcgcgctggccgccctggccgccctgggc
ctcgcggcgctgctgctcttcgtggccggcaggctgtgccggaggcgcggggcgcgctcg
cggggcggctgcgcgctgcccgaccccccgtttcctgcgcgcctgctggacgcggggccc
gcggggacgctggcgcgcggcggccgccacctgggggcgctgcggggcgcgaccggcgcc
accgaggtcaactcgctgaagccaatctttccaaacctgtctccccagattcctgggaac
gagatagagggagcgccgagcttccgcaatagtttggggttcagtattcagtaa
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