Perognathus longimembris pacificus (Pacific pocket mouse): 125339917
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Entry
125339917 CDS
T08928
Symbol
Chsy3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop01100
Metabolic pathways
Module
plop_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125339917 (Chsy3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125339917 (Chsy3)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125339917 (Chsy3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
125339917 (Chsy3)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125339917 (Chsy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Galactosyl_T
Glycos_transf_2
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
125339917
NCBI-ProteinID:
XP_048187247
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All DBs
Position
22:339576..460167
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AA seq
878 aa
AA seq
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MAVRSRRSWMSVALGLVLGFTAASWLIAPRVAELSERKRRSSSLCSYYGRLAAGPRARAP
RPLPQPQSWPRPDPSPLPARPGLRAPPPPEAAPGGSRSQSSPWQPRQRGRGPDGATGLPA
VPAAGKEPEGEDGDAAGRREGGRPGGSHNGSGDGGAAPPSSRPRDFLYVGVMTAQKYLGS
RALAAQRTWARSIPGRVEFFSSEQSSSPVRGQPPPPLPVVALPGVDDSYPPQKKSFMMIK
YMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNIEELGKLGLEP
GENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQ
QLFHENYEHNRKGYIQDLHNSKIHAAITLHPNKRPAYQYRLHNYVLSRKISELRHRTIQL
HRESALMSKLSNSEVSKEDQQLGVMPSFNHFQPRERNEVIEWEFLTGKLLYSAAENQPPR
QNINSILRTALDDTVLQVMEMINENAKSRGRLIDFKEIQYGYRRVDPLHGVEYILDLLLL
YKRHKGRKLTVPVRRHAYLQQLFSKPFFREMEELDINGLVESINSDTQPFSLIPNSLMIL
SSLQGTKEMGGQNEKKIHILVPLVGRYDIFLRFMENFENVCLIPLQNVKLVIILFSRDSG
QDSDKHVELIQDYQNKYPKADITLIPTKGEFSRGLGLEMASSQFDNDTLLLFCDVDLIFR
GDFLQRCRDNTIQGQQVYYPIIFSQYDPKVTSGGNPPTDDNFVFSKKTGFWRDYGYGITC
IYKSDLLDAGGFDTSIQGWGLEDVDLYSKVILSGLRPFRSQEVGVVHIFHPVHCDPNLDP
KQYKMCLGSKASTFASTVQLAELWLEKHLGVRYNRTLS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcgctctcgccgctcgtggatgagcgtggcgctggggctggtcctgggcttc
accgccgcgtcctggctcatcgccccccgggtggccgagctgagcgagcggaagagacgc
agctccagcctctgctcctactacggccggctggccgcgggcccccgcgcccgcgcgccg
aggccgctcccccagccccagtcctggccgcggccggacccgtctccactccccgcgcgc
ccggggctccgggcgccgccgccgcccgaggctgcgcctggagggagccgttcacagagc
agcccctggcagccccggcagcgaggacgcggacctgacggtgcgacggggcttcccgcg
gttcccgcggctggaaaggaaccagaaggggaggacggggacgcggcgggccggcgggaa
gggggccggcccgggggcagccacaacggcagcggggacgggggcgccgcccccccgagc
tcgcgaccccgggacttcctgtacgtgggggtgatgaccgcgcagaagtacctgggcagc
cgcgcgctggcggcgcagcgcacctgggcgcgctccatccccggccgcgtggagttcttt
tccagtgagcagtcctccagccccgtgcggggccagcccccgccacccctgcccgtcgtc
gcgctgccgggggtcgatgactcctaccctccccagaagaagtccttcatgatgatcaag
tacatgcacgaccactacctggacaagtacgagtggttcatgcgcgctgacgacgatgtc
tacatcaaaggggataagttagaagagtttctcagatcactgaatagcagcaagcctctc
tacctaggacagactggcctggggaatattgaagagcttggaaagctgggcctggagcct
ggggagaatttctgcatgggaggacctggcatgatcttcagtcgagaagttctcaggagg
atggtgccacatattggtgaatgcctccgggagatgtacacgactcatgaagatgtggaa
gtcggaagatgtgttcgccgctttggtgggacgcagtgcgtctggtcttatgagatgcag
caactattccatgaaaactatgaacacaaccggaagggttatatccaagacctgcacaac
agcaaaatccatgcagccataactctacaccccaacaaaaggcctgcataccaatatagg
ctgcataactatgtgctgagccgtaaaatttctgagcttcgccaccgcactatccaactc
cacagggagagtgctctgatgagcaagctcagcaacagtgaagtgagcaaggaggaccag
cagctgggagtcatgccttcttttaaccacttccagcctcgagagagaaatgaagtcata
gaatgggagttcttgacaggaaagctcctctactcagctgctgagaaccagccgcctcga
caaaacatcaatagcatcctcagaactgcactggatgacactgtcctgcaagtgatggag
atgatcaatgagaatgccaagagtagaggaaggctcattgacttcaaggaaatccagtat
gggtaccgcagagttgatcccttgcacggagtggagtacattttggacttattactcctg
tacaaaaggcacaaaggaaggaaactgactgtgccagtgagacgtcatgcctatcttcag
cagttgttcagcaagcctttcttcagagaaatggaagagttagatatcaatggtcttgtg
gaaagtattaatagtgacactcagccattctccttaatacctaattcgctaatgatatta
tcttctcttcaagggaccaaagaaatgggaggtcaaaatgaaaagaaaatacatattctt
gttcccctcgttggaagatacgacattttcttgagattcatggagaactttgaaaatgta
tgtcttatcccactgcaaaatgtaaagctggtcattatccttttcagtagggattctggc
caagattctgacaagcacgtggagctcatacaagactatcagaacaagtaccctaaagca
gatatcaccctgattcccacgaagggtgagttttccagaggtctaggccttgaaatggcc
tcctcccagtttgacaatgacactttgctgctattttgtgatgttgacttgatcttcagg
ggagactttctccagcgatgcagagacaatacaattcagggacaacaggtatactatcct
atcatctttagtcagtatgacccaaaggtaaccagtggtggaaatcctcccacagatgat
aattttgtattctcaaagaaaactgggttttggagagactatggctatggaatcacctgt
atttacaaaagtgatcttctggatgcaggtggatttgatacctcaatacaaggctgggga
ctggaagatgtagatctctacagtaaagtgattctgtctggcttaagacccttcagaagt
caagaagtaggagtggttcatattttccatccagttcattgcgatcctaacttggaccct
aagcaatataagatgtgcttaggatccaaagcaagtacttttgcctcaactgtgcagttg
gctgaactctggctagagaaacatttgggtgtcaggtacaatcgaactctttcctga
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