Perognathus longimembris pacificus (Pacific pocket mouse): 125340048
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Entry
125340048 CDS
T08928
Symbol
Nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125340048 (Nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125340048 (Nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125340048 (Nr3c1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
125340048 (Nr3c1)
Nuclear receptors [BR:
plop03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
125340048 (Nr3c1)
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GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
SCA7
Motif
Other DBs
NCBI-GeneID:
125340048
NCBI-ProteinID:
XP_048187409
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Position
22:5243278..5368434
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AA seq
777 aa
AA seq
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MDSKESLAPPSKEVPSSVLGPDRGNVMDFYKTFRGGVTVKVPASSPSLAAAAAAAALQTD
SKQPRLVVEFPKGSASHAPPQPDLSKAVSLSMGLYMGDTDTKVMGNDLGFPQQGQLSLSS
GETDFRLLEESIANLSKSTGVPENPKSSASAPTEKELPQTHPEACPEQLNLKSQAGTNGG
DVKLYTADQSTFDILQDLEFPPGSPGKEASESPWRSDLLIDDNCLLSPLAGEEDPFPLEG
DASEDCKPLILPDTKPQMKDNGETILSSPSSVPLPQVKTEKEDFIELCTPGVIKQEKLGP
VYCQASFSGANLMGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPV
GSENWNRCQGSGDDNLTSLGTMNFPGRSVFSNGYSSPGLRPDVSSPPSSSSTATGPPPKL
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGRQHNYLCAGRNDCIIDKIRRKNCPACRYR
KCLQAGMNLEARKTKKKIKGIQQAAGGVPVDASENPNKTMVPATLPQLTPTLVSLLEVIE
PEVLYAGYDSSIPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
MFLMAFALGWRSYKQTSANLLCFAPDLIIDEHRMALPCMYDQCKHMLFVSSELQRLQVSY
EEYLCMKTLLLLSSVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
LLDSMHDVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggactccaaagaatcgttagctccccccagtaaagaagtccccagcagtgttcttggc
ccagacagggggaatgtgatggacttctataaaaccttccggggaggagtcaccgtgaag
gtgccagcctcttcgccctccctggctgctgctgctgctgctgctgctctccagacagac
tccaagcagcccagactcgtggtggagttcccaaaaggatcagcaagccatgcgccgccg
cagccagacctgtccaaagccgtttctctctccatgggactgtacatgggagacacggac
acgaaagtgatggggaacgacctgggattcccccagcagggccagctcagcctctcctct
ggggaaacggacttccggctgctggaagagagcattgccaacctcagcaagtcgaccggt
gtcccagagaaccccaagagttcagcgtcggcccccaccgagaaggagctcccccaaact
caccccgaggcgtgccccgaacagctgaacctcaagagccaggccggaaccaacgggggg
gatgtcaagttgtacaccgcagaccaaagcaccttcgacatcttgcaggatttggagttt
cctcccgggtcgccaggtaaagaggccagtgagagcccttggaggtcagacttgttgatc
gatgacaactgtttgctttctcccttggccggggaggaggatccattccccttggaagga
gatgccagtgaggactgcaagcctctcattttaccggacacgaagccccaaatgaaagat
aatggggagacgatcttatccagccccagcagcgtgccactgccccaagtgaaaacggag
aaggaagatttcattgaactctgcacccctggggtaattaagcaagagaaactgggccca
gtttactgtcaggcaagcttttctggggcaaatctaatgggtaataaaatgtctgccatt
tctgtgcatggcgtgagcacctctggagggcagatgtaccactacgacatgaacaccgca
tccctttctcagcagcaggatcagaagcctatttttaatgtcattccaccaattcctgtg
ggttccgaaaattggaataggtgccaaggatctggagatgacaacctgacttccttggga
actatgaacttccctggccggtctgttttctctaatggctactcaagccctggactgaga
ccagacgtaagctcgcctccttctagctcctccacggccacaggcccacctcccaaactc
tgcctcgtgtgctccgacgaggcctcgggatgtcactacggggtcttgacgtgcggaagc
tgcaaagtgttcttcaagagagcggtggaaggtagacagcacaattatctttgtgctgga
agaaacgactgtatcattgataaaattcgcaggaaaaactgccctgcctgccgctatcga
aaatgtcttcaggctggaatgaacctggaagctcggaaaacaaagaaaaagataaaggga
attcagcaagccgcgggcggcgtccccgtggacgcttctgaaaaccccaacaaaaccatg
gtcccggccacgctgccgcagctcacgcccacgctggtgtccctgctggaggtcatcgag
cccgaggtgttgtacgcgggctacgacagctccatccccgactccacgtggcggatcatg
accaccctcaacatgctaggcggccgccaggtgatcgccgccgtcaagtgggcgaaggcc
atcccaggcttccggaacttgcacctggacgaccaaatgactctcctgcagtactcctgg
atgttcctcatggcctttgccctgggctggaggtcctacaaacagaccagtgcgaacctg
ctctgctttgcgcctgatctcatcatcgacgagcacagaatggctctcccctgcatgtac
gaccaatgcaagcatatgctctttgtctcctccgagttgcagagacttcaggtgtcttat
gaagaatatctctgtatgaaaaccttactgcttctctcttcagttccaaaggaaggtttg
aagagtcaagagctatttgatgaaatcagaatgacctacatcaaagagctaggaaaagcc
attgtcaaaagagaaggaaactccagccagaactggcagcgtttctatcagctgacaaaa
cttttggactccatgcatgacgtggttgaaaatctccttaactactgcttccaaacattt
ttggataagaccatgagtattgaattcccagagatgttagccgaaatcatcaccaatcag
ataccaaaatattcgaatggaaatatcaaaaaacttctgtttcatcaaaagtga
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