Perognathus longimembris pacificus (Pacific pocket mouse): 125340090
Help
Entry
125340090 CDS
T08928
Symbol
Hars1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125340090 (Hars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125340090 (Hars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125340090 (Hars1)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
125340090 (Hars1)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125340090 (Hars1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125340090 (Hars1)
Prokaryotic type
125340090 (Hars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
Sugarporin_N
tRNA-synt_2d
MBT
HHH_3
Motif
Other DBs
NCBI-GeneID:
125340090
NCBI-ProteinID:
XP_048187469
LinkDB
All DBs
Position
22:7526085..7538225
Genome browser
AA seq
509 aa
AA seq
DB search
MAARAELEELVRLQGERVRGLKQQKASADQIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
GTRDYSPKHMAVREKVFDVIIQCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QFDPMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAICGVPDSKFRAICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADHIGDYVQQHGGVSLVEELLQDPKLSQNKQALEGLG
DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQTGEEPLGVGSVAAG
GRYDGLVGMFDPKGRKVPCVGVSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKL
LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEETGIPLVAIIGEQELKDGVIKLRS
VASREEVDVRREDLVDEIRRRTNKPLCIC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgggcggagctggaggagctggtgcggctccagggagagcgcgtgcggggc
ctcaagcagcagaaggccagcgccgaccagatcgaggaggaggtggcaaaactcctgaaa
ctgaaggcacagctgggccctgatgagagcaaacaaaagtttgtcctcaagacacccaag
ggcacgagagactacagtcctaaacatatggcagtccgggagaaggtgtttgatgtaatc
atccagtgcttcaaacgccacggtgcagaagtgatcgatacacctgtgtttgaactaaag
gaaacactgactggaaaatatggagaagactcgaagcttatttatgacctgaaggaccag
ggcggggagctgctgtccctgcgttacgatctcactgttccttttgctcggtatttggca
atgaataaactgaccaacattaaacgctaccacatagcaaaagtatatcggcgggataac
ccagccatgacgcgaggccgataccgggaattctaccaatgtgatttcgacattgctgga
caatttgaccctatgatccccgatgcagaatgcctgaaaatcatgtgtgagatcctgagt
tcgcttcagataggcaacttcctggtcaaggtaaatgaccggcgcatcctagatgggatg
tttgccatctgtggtgttccagatagcaagttccgtgccatctgttcctccgtggacaag
ctggacaaggtatcctgggaggaagtgaagaatgagatggtgggagagaagggacttgca
cctgaggtggcggaccacattggagactatgtccagcagcatggtggggtgtccctggtg
gaggagttgctccaagaccctaaactgtctcaaaacaagcaggccttagagggcctggga
gacctgaagctgctgtttgagtacctgactctgtttggcatcgatgacaagatctccttt
gacctgagccttgcccgagggctagactattacactggagtgatctatgaggctgtgctg
ctacagaccccagcccagacaggggaggagcccctgggcgtgggcagtgtggctgctgga
gggcgctatgatggactggtgggcatgttcgaccctaaagggcgcaaggtgccctgtgtg
ggagtcagtatcggagtggagcgcatcttctccattgtggagcagagactggaggctttg
gaagagaaagtacgaaccacagagacacaggtgcttgtggcatctgcacagaagaagctg
ctggaggagagactgaagcttgtctcagaactgtgggatgctgggatcaaggctgagctg
ctctacaagaagaacccaaagttactgaaccagttgcagtactgtgaggaaacaggcatc
ccactggtggccatcattggcgagcaggagctcaaggatggggtcatcaagctgcgttca
gtggctagcagagaagaggtggatgtcagaagagaagacctcgtggacgagatcagaagg
agaacaaacaagcccctctgcatctgctga
DBGET
integrated database retrieval system
