Perognathus longimembris pacificus (Pacific pocket mouse): 125340109
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Entry
125340109 CDS
T08928
Symbol
Etf1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125340109 (Etf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125340109 (Etf1)
03012 Translation factors [BR:
plop03012
]
125340109 (Etf1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125340109 (Etf1)
Translation factors [BR:
plop03012
]
Eukaryotic type
Release factors
125340109 (Etf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
125340109
NCBI-ProteinID:
XP_048187518
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All DBs
Position
22:9272857..9301658
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AA seq
437 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGGDDEFFDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagtgctgccgacaggaacgtggaaatttggaagatcaagaagctc
attaagagcttggaggcggcccgcggcaatggcaccagtatgatatcattgatcattcct
cccaaagaccagatttcacgagtagcaaaaatgttagcagatgaatttggaactgcatct
aacattaagtcacgagtaaaccgcctttcagtcctgggagccattacatctgtacaacag
agactcaaactttataacaaagtacctccaaatggtctggttgtttactgtggaacaatt
gtaacagaagaaggaaaggaaaagaaagtcaacattgactttgaacctttcaaaccaatt
aatacgtcattgtatctgtgtgacaacaaattccataccgaggctcttacagcactactt
tcagatgacagcaagtttggcttcattgtaatagatggcagtggtgctctttttggcaca
ctccaaggaaacacaagagaagtcctacacaaattcactgtggatctccccaaaaaacat
ggaagaggaggtcagtcagccttacgatttgcccgtttaagaatggaaaaacgacataac
tatgttcggaaagtggcagagactgctgtgcagctgttcatttctggggacaaagtgaat
gtggctggtctcgttctagctgggtcagccgactttaagactgaactaagtcaatctgat
atgtttgatcagaggttgcaatcaaaggttttaaaattagttgatatatcctatggtggt
gaaaatggattcaaccaagctattgagttatctactgaagtcctctccaacgtgaaattc
attcaagagaagaaattaataggacgatactttgatgaaattagccaggacactggcaag
tactgctttggagttgaagatacactaaaggctttggaaatgggagctgtagagattcta
atagtctatgaaaatctggatataatgagatatgttcttcattgccaaggcacagaagag
gaaaaaattctctatttaactccagaacaagagaaggataagtctcatttcacagacaaa
gagacaggacaagaacatgagctgattgagagcatgcccctcttggaatggtttgctaac
aactataaaaaatttggagctacattagaaattgtcacagataaatcacaagaaggatcc
cagtttgtgaaaggatttggtggaattggaggtatcttgcggtaccgagtagatttccag
ggaatggaataccaaggaggagacgatgaattttttgaccttgatgactactag
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