Perognathus longimembris pacificus (Pacific pocket mouse): 125340171
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Entry
125340171 CDS
T08928
Symbol
Tcof1
Name
(RefSeq) treacle protein
KO
K14562
Treacher Collins syndrome protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125340171 (Tcof1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125340171 (Tcof1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
Other 90S particles
125340171 (Tcof1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
125340171
NCBI-ProteinID:
XP_048187574
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All DBs
Position
22:complement(969673..1002921)
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AA seq
1310 aa
AA seq
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MAEARKRRELLPLIYQHLLHAGYVRAAREVKEQSGQKNLLAQPVTLLDIYTHWQQTSELG
QKQKAEDDAALQAKKTRVSDPISTSESSEEEEEEEGEAGAEATKAALRVASTNSSMTTAE
SPSSRKEKGQAKTKTASKTVNSMPRANAGKALIHLLSGKSPKKAAQPSANAILVPETEEE
GSVQTLRSTARPGMVSVARPSSSSEDTSSSSDETNVEVKPSVKPAQVKTLPAPTKAPPAG
RAAPGPEKAGDVMRHTGGAALTPARRAIKPGTESESSEEEAPTGTPNQVKASGKVPQVRA
ASASAKPTPATPGRPGPSATPATRGRLGQDAESSSEESSDSEEEAPVALAPLQAKPPVKT
AQVRAASAPAKESPQKRAPPAAPMKTAPGGAQAATPKPEDSDSSSAEDSDSEGETPAAMA
PTASPAQAKTSGKSLPTRPAPDPAKGSLGKGAAPGPPQKTGPATTQAKAEEHSESSEDAS
DSEEEEAAAAGVTAAQGTCVGRGPVGRAASGPGPTPALPGTMGPAGAQVGDSESSEEDES
SGGEAAAAPAQARPSRNASEARASPASTKAPSIKGAAPGKVATAVAQARQVTPSKEKPPA
RAPPSSAVTARAPAQKGSTVGGKEDSDSSSETSDSEEEAAPAPTKPSTKTAAVSTVSVPA
KAPPGKTGPAAARALAGKREEDSNSSSEASDSGEEVAPAQTKPSAKTASVRATSAPAKES
SKKAPPAPAKESSKKAPPAPAKESPKKAPPAPAKESPKKAPPAPAGKTGPAAARAPAGKR
EEDSESSSEASDSEEEAPAAVTPVQDATSNTTKSKALTPAPPQDTEDSSDSSDDELPCSQ
VIKPPLIFVDPNRSPAGPAATPTQSRAASTPRKAQASDSSTECSSSESEDDASVIPATQS
STPAVRAKGAPVPAAPTRGAPRVGSSEESSWVPKGKKQEAAAAQVGNAVAPPQSTPVQAR
VSSKCRTPKLPVGHSKAKAPDSSGDSDDSSSTSSEGQRDGSALSRRETVVEETTSDSSED
EMVAPSQSLLSGYVSPGLTLANSQAPKATGEPHSSPAVPSAPARDDPDGRPGAEPQHTAG
PVSPKRGRKEAASGTPPKPRKKKGAVGVAGAAGAACTQALQSSLAQHLLGQPWPLSEAQV
QASVVKVLTQLLEQERKKVADATRDSGKKSRKRKLSGDQPAAGPPKSKKKKAAAGEGGEG
AVSPEKASRTPKGRSKKDRGNGDMKEKKGKGPPGPPGAKDEPGGKLGMAKAEGGEENGAK
SQKGKKKSSKKKKDKEKKEKKKKAKKITKDPDAPFQKKKKKKKKTAEQAV
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcccggaagcggcgggagctgctgcccctcatctaccagcacctgctgcac
gcgggctacgtgcgcgcggcgcgggaggtgaaggagcagagcggccagaagaaccttctg
gctcagcctgtcacccttttggacatctatacacactggcaacagacctctgagcttggc
cagaagcagaaggcagaggatgacgcagccctgcaagccaagaagactcgcgtatcagac
cctattagtacctccgagagctcggaggaggaggaggaggaagaaggggaggcaggagct
gaagccaccaaagctgccctaagagtagcatctaccaactcttcaatgaccacggcagag
tcaccatccagccggaaagaaaagggccaggcaaagaccaagacggccagcaagacagtg
aactccatgccacgtgccaacgcggggaaagccttgatccacctgctgtctggcaagtcc
cccaagaaggcagcgcagccctcagcaaatgccattttggtcccagaaactgaggaggag
ggcagtgtccagaccctcagatccactgccaggcctggaatggtgtcagtggcccggccc
agcagctccagcgaagacacctccagctcaagtgatgagaccaacgtggaggtaaagccc
tcagtaaaaccagctcaagtcaaaaccttgccagcccctactaaagcgcctccagcagga
agggctgcccccggccccgagaaggcgggtgatgtgatgcgccacaccgggggagctgcc
ttaactccagccaggagggcgattaaaccaggaacagagtctgagagcagcgaggaagag
gcccccacggggacacccaaccaggtaaaggcctctgggaaagttccccaagttcgagct
gcttcagcttctgccaagccgactcccgcaacccccggaaggccagggccctcggccacc
ccggccacgagaggaaggctggggcaggatgccgagagcagcagcgaggagtcgtctgac
agcgaggaagaagcgcccgtcgccctggccccgcttcaggcaaaacccccagtgaagacg
gcgcaggtcagagcagcctcggcgcctgccaaggagtccccccagaaacgagcccctcca
gcggcccctatgaagacagcacctgggggggcccaggccgcgaccccgaagcccgaggac
tcagacagcagcagcgcagaggactcggacagtgaaggggagacgccggcagccatggca
ccgacggcgagccccgcgcaggcaaagacctcagggaagagcctcccaaccagacctgcc
cccgatcccgccaagggctccttggggaaaggagctgccccggggcccccccagaagact
gggcccgcgaccacccaggccaaggctgaagaacactcggagagcagcgaggacgcgtcc
gacagcgaggaagaggaggcggcggcggcgggggtgactgcagctcagggaacgtgcgtg
ggcagaggacccgtggggagagctgcctcggggccgggacccacgccggcactccctggg
acgatggggcctgccggtgcccaggtcggggactccgagagcagcgaggaggacgagtcc
agcggtggggaggccgcggcggccccagcacaggccaggccctcgaggaacgcctctgag
gccagagccagcccggcttccacaaaggctccttcgatcaagggagcagcgcctggcaag
gtggccactgcagttgcccaagcaagacaggtcaccccatccaaggaaaagcctcccgcc
agagcccctccgagcagtgccgtcaccgcaagggccccagcacagaaggggtcgactgtg
gggggaaaagaggactcggacagcagcagcgagacgtccgacagcgaggaggaggcagca
cctgccccgacaaagccctcaaccaagacggctgcggtcagcaccgtctcagtccctgcc
aaggcaccccctgggaagacggggcctgcggccgcccgggccctagctgggaagcgagag
gaggactcgaacagcagcagcgaggcgtcagacagcggggaggaggtggcgcccgcccag
acaaagccctccgctaagacggcttccgtccgcgctacctcagctcctgctaaagagtcc
tccaagaaagcccccccagcacccgctaaagagtcctccaagaaagcccccccagcaccc
gctaaagagtcccccaagaaagcccccccagcacccgctaaagagtcccccaagaaagcc
cccccagcacccgctgggaagacggggcctgcggccgcccgggccccagctgggaagcga
gaggaagactcggagagcagcagcgaggcgtcagacagtgaggaggaggcgccagccgct
gtgaccccagtccaggatgctacttccaacaccaccaaaagcaaggccctgaccccagct
cccccacaggacacagaagactcctcagacagcagtgatgacgagctgccttgcagccag
gtgattaaaccccctctgatttttgtcgaccctaatcgtagtccagctggcccagctgct
acccccacacaatcccgggccgcaagcaccccaaggaaggcccaggcctcggacagcagc
accgaatgttcttcctccgagagcgaggacgatgcgagtgtgatccccgccacccagtcc
tccactcctgctgttagagccaagggggcgcctgtgcctgctgcccccacgaggggagcc
cccagagttggcagcagcgaggaatccagttgggtacccaagggcaagaagcaggaggcg
gccgccgcgcaggttggtaatgccgtggcgcctccccagagcacccctgtccaggcccga
gtgagcagcaagtgcagaacacccaagcttcccgtgggccactccaaagccaaggcccct
gacagctcaggcgacagcgatgacagcagcagcacctcttcggagggccagcgggacggt
tcagccctgtcccggagggagactgtggtggaggagaccacatccgactccagcgaggac
gagatggtggcaccttcccagtctctcctctcaggttatgtgagtcctgggctgaccctg
gccaattcccaggctcccaaggccactggcgagccacactccagtcccgcggtgccctct
gctccggccagagacgacccagacgggaggccgggagcagagccccaacacacagcaggc
cccgtgtcccccaagagaggcaggaaggaggccgcctcgggcacacctccgaagccccgc
aagaagaagggagccgtgggcgtggcgggcgcggcgggcgcggcctgcacgcaggcgctg
cagagcagtctggcccagcacctgctggggcagccctggcccctgagcgaggcccaggtg
caggcgtcggtggtgaaggtcctgacgcagctgctggagcaagagaggaagaaggtcgca
gacgccaccagagacagcggcaagaagagccggaagcggaagctgtcgggggaccagcca
gccgccgggccccccaagagcaagaagaagaaggcggccgctggggaaggaggggagggt
gccgtctccccagaaaaggcctccaggactcccaaagggcgatcaaagaaggaccggggg
aatggtgacatgaaggagaagaaggggaaggggcctcccggcccccccggggccaaggac
gagcccggagggaagctggggatggcgaaggccgagggcggagaggaaaacggcgccaag
agccagaaaggaaagaagaaatccagtaagaaaaaaaaagacaaggagaaaaaagagaag
aagaagaaagcaaaaaagataaccaaagatcctgacgcaccattccagaagaaaaagaag
aaaaagaagaagacggcagagcaggcggtgtga
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