Perognathus longimembris pacificus (Pacific pocket mouse): 125340200
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Entry
125340200 CDS
T08928
Name
(RefSeq) protocadherin beta-14-like
KO
K16494
protocadherin beta
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125340200
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Protocadherins
125340200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125340200
NCBI-ProteinID:
XP_048187602
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Position
22:complement(7170505..7172995)
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AA seq
787 aa
AA seq
DB search
MGIREAPTLQKRQVLLFFVLLGLSHASTESVRYSVSEETETGFVVANLLKDFSLGVEDLS
SREARVVSDDNKKHLRLDLLTGDLLLNEKLDREELCGSTEPCVLHLQVVLENPLQFFQAE
LHVKDINDNSPAFLDKEIILRISESTPIGTTFPMESAEDVDIGKNSLQNYTISPNSHFHI
KVRNNVDGKIYPELLLDSALDHEKQSELRLTLTALDGGSPPRSGTTLVLVEVLDINDNAP
KFAQSLYEVQVPEDTPIGSWIITMSAKDLDAGNHGKISYTFFHASEGIRKTFEMDSLSGE
VHLKSALDFELVQSYGITVQATDGGGLSEECTLRVDVLDVNDNPPEITMSSVTKTIKENA
PETLVALFSVRDRDAGDNGRMVCSVEEDLPFILKPTVKNFYTLVTERPLDREEREEYNIT
ITVTDAGSPRLRTQHTLAVRVGDENDNAPEFTQACYTLRVRENNSPALALGSVRATDRDA
GSNAQLSYSLLAGPQPGPDAAALVSIDADSGQLFALRPLDYEALPAFELRVRAADRGAPP
RSSQARVRVQVLDANDHAPRVLYPPQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQNA
WLSFRLLQATEPGLWGVAPHNGEVRTARPLSERDAPRHRLLLLVQDHGEPPRSASVALHV
LLVDGFSQAYLPPPAAPPERAQPDRLAASLLVALAALAALGLAALLLFVAGRLCRRRGAR
SRGGCALPDPPFPARLLDAGPAGTLARGGRHQGALRGDSARSEFTFLKSVILNHQGAVNG
MDENPPL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccgagaggcacccactctgcagaaaaggcaagtcctgcttttctttgtttta
ttgggattgtctcatgcaagcactgaatcggtgcgctattctgtgtcagaggaaaccgaa
acgggctttgttgtggctaatcttctgaaggacttcagtctaggggtggaggacctgtcc
tcccgggaagccagggttgtgtctgatgataacaaaaagcatttgcgccttgatttgttg
acgggagatttgcttctaaatgagaaactggacagagaggagctgtgcggctccacagag
ccctgtgtgctgcatttgcaggtggtattggaaaatcctttacagttttttcaggctgaa
ctgcacgtcaaagacataaatgataactcccctgcattcttagacaaggaaatcattttg
agaatatcagaaagtactcccatcggaaccacatttccaatggaaagcgctgaagatgta
gacataggaaagaacagtcttcagaactacacaattagccccaactcccacttccacatt
aaagttcgaaacaatgtcgatgggaagatatacccagagctgcttctggattcagcccta
gatcacgagaagcaatcggagctcagattaacactcacagccctggatggtgggtctccc
cccaggtctggaacaactttggttcttgtggaggttttggatatcaatgataatgctcct
aagttcgctcagagtctctatgaggtgcaggtgccagaggacacgcccattggctcctgg
attatcaccatgtctgctaaggacttggatgcaggaaaccatgggaaaatatcctacaca
tttttccacgcatctgaaggtattcgtaaaacatttgaaatggactcattatctggggaa
gttcacttgaaatcagcactggattttgaactagtgcagtcctatggtataactgttcag
gcaacagatggtgggggtctttcagaagaatgcactcttagagttgacgtcctggatgtc
aatgataatccacccgaaataacaatgtcttcagttacaaagactattaaggagaatgct
cccgagaccctggtcgctctatttagtgttcgagaccgcgatgctggagacaatggaaga
atggtttgctctgttgaagaagatctccccttcatcctgaaacccaccgtcaagaacttc
tacaccctggtgacggagcggccgctggaccgggaggagagagaggagtacaacatcacc
atcaccgtgacggacgcggggagcccccggctgcgcacgcagcacacgctcgccgtgcgc
gtgggcgacgagaacgacaacgccccggagttcacgcaggcctgctacacgctgcgcgtg
cgcgagaacaacagccccgccctggccctgggcagcgtgcgcgccaccgacagggacgcg
ggcagcaacgcgcagctgagctactcgctgctggccgggccgcagcccgggcccgacgcg
gcggcgctcgtgtccatcgacgccgacagcgggcagctgttcgccctgaggccgctggac
tacgaggccctgccggcgttcgagctgcgcgtgcgcgccgccgaccgaggcgcgcccccg
cgcagcagccaggcgcgggtgcgcgtgcaggtgctggacgccaacgaccacgcgccccgg
gtgctgtacccgccgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcggcc
gagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaacgcc
tggctgtcgttccggctgctgcaggccacggagcccgggctgtggggcgtggcgccgcac
aatggcgaggtgcgcaccgcgcggccgctgagcgagcgcgacgcgccccgccaccggctg
ctgctgctggtgcaggaccatggcgagccgccgcgctcggccagcgtggcgctgcacgtg
ctgctggtcgacggcttctcgcaggcctacctgccgccgcccgccgcgccgcccgagcgc
gcgcagcccgaccgcctggccgcctcgctgctcgtcgcgctggccgccctggccgccctg
ggcctcgcggcgctgctgctcttcgtggccggcaggctgtgccggaggcgcggggcgcgc
tcgcggggcggctgcgcgctgcccgaccccccgtttcctgcgcgcctgctggacgcgggg
cccgcggggacgctggcgcgcggcggccgccaccagggggcgctgcggggagactcggcg
aggagcgagtttaccttcctgaagtctgttattctcaaccatcaaggcgcagtgaacggt
atggacgaaaatccaccgctgtga
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