Perognathus longimembris pacificus (Pacific pocket mouse): 125340278
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Entry
125340278 CDS
T08928
Symbol
Ppl
Name
(RefSeq) periplakin isoform X1
KO
K10386
periplakin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125340278 (Ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125340278 (Ppl)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125340278 (Ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
Spectrin_4
Spectrin
DUF7102
Motif
Other DBs
NCBI-GeneID:
125340278
NCBI-ProteinID:
XP_048187655
LinkDB
All DBs
Position
23:14492673..14522521
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AA seq
1758 aa
AA seq
DB search
MNSLFRKRNKGKYSPSVQTRSISNKELSELIEQLQKNADQVEKNIVDTEAKMQSDLGRLQ
EGRQPEHQDVALQKTSDSEKLLYVLEADSAIAKHMRHPQGDMIAEDIRQLKERVANLRKK
HKQIYSLAVKEMDPQVNWASLVEEKLDKLSGQGFGTELPLVDSQVEQHNIFHNEVKAIGA
HLAKDGDKEQNSELQAKYQKLLAASQARQQHLSSLQDYMQRCTNELYWLDQQAKARVQYD
WSDRNLDFPSRRRQYENFINRNLEAKEERINKLHSEGDQLLAADHPGRNSIEAHMEAVHA
DWKEYLNLLICEESHLKYMEDYHQFHKDLKDAQELLRKVDSDLNQKYSPDFKDRYQIELL
LRELDDQEKALDKYEDVVRGLQRRGQQVVPLKFRRETPLKPIPVEALCDFEGDQGLISRG
YSYTLQKNNGESWELTDSAGNKLTAPAVCFIIPPTDPEALALADSLGSQYRSVRQKAAGS
KRTLQQRHEVLRTENPGDASDLQGRQLLASLDKVASDLDRQEKAVTGILRPPLEQGRAVQ
DSAERSKDLKNITNEVLRMEAEKARSTAECEAFAQALPGSGTAPLLRSRVENINRKYERL
VQLLNSAQEKVDTANRLEKSLQQGRELLASHETWLIQDETVPESQNILDSKRQELEAMAS
ELQAQKSLLGEVEQNLQAVKQCSNSLASRFQEHCPDLERQEAEVHKLCQRFDNLCQQVER
RAQSLQSARAAYDEYRRGYDHVLQFLSNTPSYEPQETDSLSQVETKLKNQKNLLDELASR
EQEVQEVYTNSQQYQQAVKDYELEAEKLRSLLDLENGRNSHTGKRARLQSPAAKVKEEEA
TLAAKFTEVNAINRQRLQNLEFALHLLRQQPEAEVTQETLQGSRPGSGVEEPWKIKKELE
EEMERRQQLEKEVRSAQEEIRALQNQGPQESLVRKEVLKKVPDPELEESFQKLQQTLAEE
QHKNQLLQEELEALQARLKALEHEMRDGGQEYVVKEVLRIEPDKTQADEVLQLREELEVL
RRQKGAREAEVLLLQQRVAALAAEKSQVQEKVIEKEVVKLQNDPELEAEHRRLQEESQQE
GRLREKHEEELSFLQAKLRRLEKERAMAEGKITVKEVLKVEKDVAAEREVSELTHQYEDE
AAKARAGQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQER
RYRGAEEQLKSYQSELEALRRRGPQVEVKEVTKEVIKYTTDPETEKELQRLREEIVDKTR
LIERCDLEIYQLKQEIQSLKDTKPQVQTREVVQEILQFQEDPQTKEEVESLRMKLSEEQK
KQVDLQAEQVIQEEKIRNKEEELAQGKERVVRQEVVQYEEEPDLRAEVSAFTDSIDAELR
QIDKLRAELRRLQRRRGELERQLEELERERQARRAAELEVQCLQQRLAVLEQKEAEAEAG
EKVTRTQKVVLQPDPQQTREHALLQAQLDEERHRRQLLEGELEPLRRKLATLEKAEIKEK
VVVSESIQVDKGDTEQEIQKLRKSLEEESRSKRELDTEVTRLEAKLSELEFYNSKSSKEL
DFLREENHKLQLERQNLQLETRRLQSEIEMVGTETRDLQKMTSVDAGTNQDSRLWSLERE
LDELKRLSKDKDLEIDELQRRLGSVAVKREQRENHLRRSIVVIDPDTGRELSPEEARRAG
LIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEDALRSGRLTPAQYDRY
VNKDMSIQELAVLVSGQK
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgctgttcaggaagagaaacaaaggcaaatacagcccctccgtgcagacccgc
agcatctccaacaaggagctctcggagctgatcgagcagctgcagaagaatgcagaccag
gtggaaaagaacattgtggacacggaggccaagatgcagagtgacttgggccggctgcag
gagggacggcagccagaacaccaggatgtggcactacagaagacatccgactcggagaag
ctgctttatgtgctggaggccgactcggccatcgccaagcatatgcggcacccgcagggg
gacatgattgctgaggacatccgccagctaaaagagcgagtagccaatctccgcaagaaa
cacaagcagatctacagcctggcggtgaaggagatggacccccaggtcaactgggcgtca
ctggtggaagagaagctggacaagctgagtggccagggttttgggacggagctgccgctg
gtagacagccaggtggaacagcacaacatcttccacaacgaggtcaaggccatcggggcc
cacctggctaaggatggggacaaggaacagaacagcgagctgcaggccaagtaccagaag
ctgctggctgcgtcccaggcccgacagcaacacctgagctcgctgcaggattacatgcag
cgctgcaccaatgagttgtactggctggaccagcaggccaaggcccgcgtgcagtacgac
tggagtgatcgcaacctggacttccccagccgccggcgccagtatgagaattttatcaac
cggaatctggaggccaaagaagagagaatcaacaagctgcacagtgagggagatcaacta
ctggcagctgaccacccggggaggaactccattgaggcccacatggaagccgttcatgca
gactggaaggagtacctgaacctgctcatctgcgaagagagtcacctgaagtacatggag
gattaccatcagttccacaaagacttgaaggacgctcaagagctgctgcgcaaggtggac
tcggacctcaaccagaaatacagccccgacttcaaggaccgataccagatcgagcttctg
ctgcgtgagctggacgaccaggagaaggccctggacaaatacgaggatgtggtgcggggg
ctgcagaggcgcgggcagcaggtggtgccgctcaaattccgccgggagacacccctcaag
cccatccctgtggaggcgctctgtgactttgagggtgaccagggcttgatctcccgtggc
tatagctacaccttgcagaagaacaacggggagagctgggaactaacagatagcgctggg
aacaagctgactgcccccgccgtgtgcttcatcatccctcccactgacccagaggccctg
gctctggctgacagcttgggcagtcagtaccgaagtgtgcgacagaaggcggcaggaagc
aagcgcaccctgcagcagcggcacgaggtgctgaggacggagaaccctggagatgcctct
gacctgcagggacggcagctgctggccagcttggacaaggtggccagtgacttggacaga
caggagaaagccgtcacggggatcctgcggccacccttggagcagggacgggctgtgcag
gacagtgctgagcggtccaaggacctcaagaacatcaccaacgaggtgttgcggatggag
gcggagaaggcccggagcacagccgagtgcgaggcgttcgcccaggcactccccggcagt
ggcacagcacccttgctgaggagccgggtggagaacattaatcggaaatacgagcgcctg
gtgcagctgctcaactcggcccaggagaaggtggacacagccaaccgccttgagaagagc
ctgcagcagggccgggagctgctggcctcccacgagacctggctgatccaggacgaaaca
gtgccagagagccagaacattctggacagcaagaggcaggagctggaggccatggcctct
gagctgcaggcccagaagtccctcctgggtgaggtggagcagaacctgcaggccgtcaag
cagtgctcaaactccctggccagccgcttccaggagcactgtccagatctggagcgccag
gaggctgaggtgcacaagctgtgccagcgcttcgacaacctgtgccagcaggtggagcgc
agggcccagagcctgcagagtgccagggctgcctacgacgaatatcgccgtggctatgac
catgtgctccagttcttgtccaacacccccagctacgaaccccaggagactgacagcctc
agccaggtggagaccaagctgaagaaccagaagaacctgcttgatgagctagcaagcagg
gaacaggaggttcaggaagtctacaccaattcccagcagtatcagcaggctgtgaaggac
tatgagctggaggcagagaagctacggtccctccttgacttggagaatggaaggaacagc
cacacgggcaagcgagccaggctgcagtctccagctgccaaagtgaaggaggaggaagcc
actctggctgccaagttcacagaagttaacgccatcaacaggcagaggctgcagaacctg
gagtttgcgctccatctcctgagacagcagccagaagcagaagtgacccaggagactctg
caagggagcaggccaggctccggcgtggaggagccgtggaagatcaagaaggaactggag
gaggagatggagaggaggcaacagctcgagaaagaggtcaggagcgcccaggaggaaatc
cgggccctgcagaaccaggggccacaggagtccctggtgcggaaagaggtgctcaagaag
gtgccagaccccgagctggaggagagcttccagaagcttcagcagaccttggctgaagag
cagcacaagaaccagctgctgcaagaggagctggaggccctgcaggcgcggctgaaggcc
ctggagcatgagatgcgcgacggaggccaggagtacgtggtgaaggaagtcctgcgcatc
gagcccgacaagacacaggcagatgaggtcctgcagctgcgggaggagctagaggtgctg
cgacggcagaagggcgcccgggaggccgaggtgctcctcctgcagcagcgtgtggctgcc
ctggctgctgagaagagccaggtgcaagagaaggtcatagagaaggaggtagtgaagctg
cagaatgatccagagctggaggccgagcaccggcggctgcaggaagagagccagcaggaa
ggtcggctccgggagaagcatgaggaggagttgagcttcctgcaggccaagctcaggcgg
ttggagaaggagcgggccatggccgagggcaagatcaccgtcaaggaggtgctcaaggtg
gagaaggacgtggctgccgagagggaggtcagtgagctcacccaccagtatgaggatgag
gcggccaaggctcgcgctggccagcgggagaagacggagctgctccggaagatctgggcc
ttagaggaggagaatgccaaagtggtggtgcaggagaaagtcagggagattgtgcggccg
gaccccaaggctgagagcgaagtagctaaccttcgcttggagctggtggaacaggagcgc
aggtacaggggtgctgaggagcagctcaagagctaccagagcgagctggaggccctgcgg
aggcgtggcccccaggtggaagtgaaggaagtgaccaaggaagtgatcaagtacaccaca
gaccccgagacagagaaggagctccagcggctcagggaggagatcgtggacaagaccaga
ctgatcgaaaggtgtgatctggagatctaccagctcaagcaagagatccagtctctgaaa
gacaccaagccacaggtccagaccagagaagtggtccaggagatcctccagttccaggaa
gatcctcaaaccaaggaagaggtggagtctctacgcatgaagctgtccgaagagcagaag
aagcaggtagatctacaggcagagcaggtgatccaggaggagaagatcaggaacaaggag
gaagagctagcacaggggaaggagagagtagtacgccaggaggtggtacagtacgaggag
gagccggacctgcgggccgaggtgagtgccttcactgacagcatcgatgctgagctgcgg
cagattgacaagttgcgggctgagctccgtcggctccagcgccggcgcggggagctggag
cggcagctggaggagctggagcgggagaggcaggcgcgcagggcagccgagctggaggtg
cagtgcctgcagcagcggctggcagtgttggaacagaaggaggctgaggcggaggctgga
gagaaggtgacccgcacgcagaaggtggtcctgcagccggacccgcagcagacccgggag
catgccctgcttcaagcccagctcgacgaggagcggcataggaggcagctgctggaaggt
gagcttgagcccttgcgtagaaagctggccaccctggagaaggcggagatcaaggagaag
gtggtagtctctgagagtatccaggtggacaagggcgacacagagcaggagatccagaag
ctccggaagagcctggaggaggagagccggagcaagagagagctggatactgaggtgact
cgactggaagccaagctgtcggaactagaattctacaactccaagtcatccaaagaactt
gacttcctcagggaagagaaccacaaattgcagctggagcggcaaaacctgcagttggag
acccggagactccagtcagaaattgaaatggtggggacagagacccgagatctgcaaaag
atgacctccgtggatgccggcaccaaccaggactccagactgtggtccctggagagggag
ctggatgaactcaagaggctgtccaaggacaaggacctggagattgatgagctgcagaga
cgcctgggctcggtggccgtcaagagggagcagcgggagaatcacctgcggcgctccatc
gtggtcatcgacccagacacagggcgagagctgtccccagaggaggcccgccgggcaggg
ctcatcgactggaacatgttcgtgaaacttagaagccaagagtgtgactgggaggagata
tcggtgaaaggccccaacggggagtcctcagtgatccatgatcgcaagtctggtaagaag
ttctccattgaggatgccctgcggagcggccggctgacccctgctcagtatgaccgctat
gtcaacaaagatatgtccattcaggagctggcggttctggtgtctgggcagaagtag
DBGET
integrated database retrieval system
