Perognathus longimembris pacificus (Pacific pocket mouse): 125340336
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Entry
125340336 CDS
T08928
Symbol
Stx1b
Name
(RefSeq) syntaxin-1B isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04130
SNARE interactions in vesicular transport
plop04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125340336 (Stx1b)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
125340336 (Stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125340336 (Stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125340336 (Stx1b)
Membrane trafficking [BR:
plop04131
]
SNARE
Syntaxin (Qa)
Stx-PM
125340336 (Stx1b)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
125340336 (Stx1b)
Exosomal proteins of other body fluids (saliva and urine)
125340336 (Stx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Spectrin_Anc-1
Relaxase_C
Baculo_PEP_C
FAD_binding_1
Polysacc_deac_2
TolA_bind_tri
YtxH
CAP_N
VBS_C3G9
Motif
Other DBs
NCBI-GeneID:
125340336
NCBI-ProteinID:
XP_048187791
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All DBs
Position
23:complement(6991335..7013389)
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AA seq
291 aa
AA seq
DB search
MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRVSRVFLWLLGDGGQPGGGGGAGLRPGLWW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcggacccaggagctgcggagtgcaaaagacagcgatgatgaggaggaggtg
gtccacgtggaccgagaccactttatggatgagttctttgaacaggtggaggagattcga
ggctgcattgagaagctgtccgaggatgtagagcaggtgaaaaaacaacatagcgccatc
ctggctgcccccaacccagacgagaagaccaagcaggagctggaggacctcaccgccgac
atcaagaagacggccaacaaggtccggtccaaattgaaagcgatcgagcagagcattgaa
caggaagaggggctgaaccgttcctctgcggacctgcgcatccgcaagacccagcactca
acactctcccggaagttcgtggaggtaatgaccgagtataatgcgactcagtccaagtac
cgagaccgctgcaaggaccggatccagcggcagctggagatcaccggcaggaccaccacc
aatgaagagctggaggacatgctggagagcgggaagctggccatcttcacggacgacatc
aaaatggactcccagatgacaaagcaggccctaaatgagatcgagaccagacacaatgag
attatcaaactggaaaccagcatccgcgagctgcacgacatgtttgtggacatggcgatg
ctcgtggaaagccagggagagatgattgatcgcattgagtacaacgtggaacattccgtg
gactatgtagagcgagctgtgtctgacaccaagaaagccgtgaaatatcagagcaaggcc
cggagggtgagcagggtgttcttgtggctgctgggggatgggggccagccaggaggcggg
ggaggggctgggctcaggccaggcctgtggtggtga
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