Perognathus longimembris pacificus (Pacific pocket mouse): 125340355
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Entry
125340355 CDS
T08928
Symbol
Xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
plop01100
Metabolic pathways
Module
plop_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125340355 (Xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125340355 (Xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125340355 (Xylt1)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
125340355 (Xylt1)
Glycosyltransferases [BR:
plop01003
]
O-Glycan biosynthesis
Glycosaminoglycan
125340355 (Xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
125340355
NCBI-ProteinID:
XP_048187833
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All DBs
Position
23:complement(8526788..8682056)
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AA seq
970 aa
AA seq
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MVAAPCARSLARRSRSALLAALTVLLLQTLLAWNFSSLDSGPGAGAAAGGRRGGAAGAGG
AAERPNPAPAPGPRRERRDLPAAARGAGGPGGAGGAGGGRGAPAARARGAGPGEARAQQP
AGRGALPGRSRDPHPSPLIALGTPDGYLSHRPKEKVRTDSNNENSVPKDFENVDNSNFAP
RTQKQKHQPESAKRPPGRQKERLQRKPEPQDKGHLVPGKGFKEALPLGRRAAANSSQAKD
VPGQPHARKSGGASPEAKYEQPPKCDISGKEAISALSRAKSKHCRQEIAETYCRHKLGRL
MPEKVTRFCPLEGKANRNVQWDEDSVEFMPSNPVRIAFVLVIHGRASRQLQRMFKAIYHR
DHFYYIHVDKRSNYLHRQVLQFAAQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLQMP
DWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECD
AHMWRLGDRRIPEGISVDGGSDWFLLNRKFVEYVTFSTDDLVTKMKEFYSYTLLPAESFF
HTVLENGPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRFQQTAR
PTFFARKFEAVVNQEIIGQLDYYLYGNYPAGTPGLRSYWENVYDEPEGVHSLNDVMLSLL
HSFTRLGLRRAAASLRPSSDATEDSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLGV
SKLETLETWVMPKKVFKVASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGM
QKWGKGPNVTVTVVWVDPINVIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHW
VPVAETKFLVAPLTFSNRQPIKPEEALKLHSGPPRNAYMEQSFQSLNPVLSLPISPAQVE
QARRNAASTGAALEGWLDALVGTMWTAMDVCATGPSACPAMQACSQTAWSSFSPDPKSEL
GAVKPDGRLR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgccgtgcgcccggagcctggcccggcgctcgcgctcggcgctgctggcg
gcgctcacggtgctgctgctgcagacgctgctcgcctggaatttcagcagcctggactcg
gggcccggggccggggccgcggccggggggcgccgcgggggcgccgcgggggccggcggg
gcggcggagcgccccaacccggccccggccccgggcccgcgccgcgagcgccgggacctg
cccgcggcggcccgcggagccggcggccccggaggagctgggggagccggcggaggacgc
ggggccccggcggcgcgggcgcggggagccggccccggagaagcccgcgcgcagcagccg
gccggccgcggggcgctgcccggccgatcgcgggacccgcacccgagtccgctgatcgcg
ctggggaccccggatggatacttgtctcaccggcccaaggagaaagtacgaacagacagc
aacaatgaaaactcggtccctaaggacttcgagaatgtagacaatagcaacttcgcaccc
aggactcaaaagcagaagcaccagccagagtctgcgaagagacccccgggtcggcagaag
gagcggctgcagaggaaaccagagcctcaggacaaaggacatttggtcccagggaaaggc
ttcaaggaggcgctacctctgggccggagagccgcagccaacagcagccaggcaaaggat
gtgcccggacagccccatgccaggaaaagcggcggtgcctccccagaggccaaatacgag
cagccacccaagtgcgacatctcaggcaaagaggccatctccgccctgtcccgcgccaag
tccaagcactgccgccaagagatcgccgagacctactgccgccacaagctggggcggctg
atgccagagaaggtgacccgcttctgtcctctggagggcaaggccaacaggaacgtccag
tgggacgaggactcagtggagttcatgccgtccaaccccgtcagaatcgccttcgtcctg
gtcatccacggccgcgcctcccgccagctgcagcgcatgttcaaggccatctaccaccgg
gaccacttctactacatccacgtggacaagcgctctaattacctgcaccgccaagtgctc
cagtttgccgcgcagtacagcaacgtgcgggtcaccccctggaggatggccaccatctgg
ggcggagccagcctcctgtccacctacctgcagagcatgcgcgacctcctgcagatgccc
gactggccctgggacttcttcatcaacctcagcgccgccgactaccccatcaggacgaat
gaccagctggtggcatttctctcccggtaccgagatatgaatttcctgaagtcacacggc
cgggacaacgcaaggttcatccggaagcaaggcctggaccggctcttcctggagtgcgac
gcccacatgtggcgcctgggggaccggcgcatccccgagggcatctccgtggacgggggc
tccgactggttcctgctgaaccgcaagttcgtggagtatgtgacgttctccacggacgac
ctggtgaccaagatgaaggagttctactcttacacgctgctgccggccgagtccttcttc
cacacggtgctggagaacggcccccactgcgacaccatggtggacaacaacctgcgcatc
accaactggaaccgcaagctgggctgcaagtgccagtacaagcacatcgtggactggtgt
ggctgctcccccaacgacttcaagccgcaggacttcctccgcttccagcagacggcccgg
cccaccttcttcgcccgcaagttcgaggccgtggtgaaccaggagatcatcggtcagctg
gactactacctgtacgggaactacccagcgggcacgccgggcctgcgctcctactgggag
aacgtctacgacgagcccgagggcgtgcacagcctcaatgacgtgatgctcagcctgctg
cactcgttcacacgcctgggcctgcggcgggccgccgcctccctgcgccccagctccgac
gccaccgaggatagctgcaggtactaccccatgggccacccagcctccgtccacctctac
ttcctcgcggaccgcttccagggctttctgatcaagcaccacgccaccaacctgggtgtg
agcaagctcgagactctggagacgtgggtgatgccgaagaaagtcttcaaggtcgccagt
cccccgagtgacttcgggaggctccagttctctgaggtgggcactgactgggacgccaag
gagaggcttttccgcaactttggggggctcctggggccgatggacgagccggtgggcatg
cagaagtgggggaaggggcccaatgtgacggtgaccgtggtctgggtggaccccatcaac
gtcatcgccgccacctacgacatcctgatcgagtccacggcagagttcacgcactataag
ccccccctgaacttgcccctgaggcccggggtgtggacagtgaagatcctccaccactgg
gtgccggtggccgagaccaagtttctcgtggcccctctgaccttctccaacaggcaaccc
atcaagcccgaggaggcgctgaagctgcacagtgggccccctcgcaacgcctacatggag
cagagcttccagagcctgaacccggtgctcagcctgcccatcagcccggcccaggtggag
caggcgcggaggaacgcggcctccacgggcgcggccctggagggctggctggacgcactg
gtgggcaccatgtggacggccatggacgtgtgcgccaccggccccagcgcctgccccgcc
atgcaggcctgcagccagacggcctggagttccttcagccccgaccccaagtcggagctg
ggcgccgtcaaacccgacggccggctcaggtag
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