Perognathus longimembris pacificus (Pacific pocket mouse): 125340500
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Entry
125340500 CDS
T08928
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125340500 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125340500 (Myo5a)
04131 Membrane trafficking [BR:
plop04131
]
125340500 (Myo5a)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125340500 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125340500 (Myo5a)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125340500 (Myo5a)
mRNA cycle factors
P-body specific factors
125340500 (Myo5a)
Membrane trafficking [BR:
plop04131
]
Others
Actin-binding proteins
Myosins
125340500 (Myo5a)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125340500 (Myo5a)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125340500 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
AAA_16
AAA_22
Myosin_N
nSTAND3
DUF5382
Motif
Other DBs
NCBI-GeneID:
125340500
NCBI-ProteinID:
XP_048188098
LinkDB
All DBs
Position
23:26192220..26297945
Genome browser
AA seq
1877 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKILLLHLEEGKDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGDANNFHYTKQGSSPVIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFTSRDSDSCAIPPKHEPLSIF
CDLMGVDYEEMSHWLCHRKLATATETYIKPISKLQATNARDALSKHIYAKLFSWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLSRTPVKPTKGRPGQIAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKYLRMQRAAITVQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRRRYKIRRAA
TIVLQSRLRGYLARNHYHRILREHKAVIIQKWVRGWLARKHYKRSLRAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTSLEGAYSSE
TEKLRNDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTQSEKKSIEERADKYKQET
EQLVSNLKEENSLLKQEKEVLNHRIVEQAKEMTETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMVNVPKPGHKRTDSTHSSNESEYTFSSEMAETEDIPSRT
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVMQDELDRREEQVLRSKAKEEERPQLRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDATILLEDVQKMKDKGEIAQAYIGLKETNRSSA
MDCHELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRIIDLMEQ
LEKQDKTVRKLKKQLKLFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
SIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSILRQLNSFHSVMCQHGMDPELIKQVAKQMFYIVGAVTLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQ
IVKVLNLYTPVNEFEERVSVSFIRTIQVRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFISRV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtcggagctctacacaaagtttgccagggtttggatacctgatcctgaggaa
gtttggaagtcagcagagttgctcaaagattataagcctggagataaaattctcctgctt
cacttggaggaaggaaaggatttggagtaccgtctagatcccaaaaccaaggagctgcct
cacttacgaaacccagacatccttgttggtgaaaatgacctcacagccctcagctacctt
catgagcctgctgtgctccataatctcagagtccgttttattgactccaaacttatttat
acatactgtggaatcgtcctagtagctataaatccctatgaacagctgcccatctatgga
gaagacatcatcaatgcatacagtggtcagaacatgggggacatggatccccacatcttt
gcagtggctgaagaagcttataagcaaatggctagagatgaacgaaatcagtccatcatt
gtaagtggagaatctggagcaggaaaaactgtctcggctaagtatgccatgagatacttt
gccaccgtgagtggctctgccagtgaggccaatgtggaggagaaggtcctggcctccaac
cccatcatggagtcaattggaaatgctaaaacaaccaggaatgacaatagcagccgtttt
gggaagtatattgagattggctttgataaacgatatcgaatcattggtgccaatatgaga
acttaccttttagagaaatccagagtggtattccaggcagaagaagagagaaactaccat
atcttctatcagctctgtgcttcagcaaagttacctgaatttaaaatgctacgattagga
gatgcaaataacttccattacacaaagcaaggaagtagtcctgtgattgaaggagtggac
gatgcaaaggagatggcccacaccaggcaggcctgcactctgctggggattagtgaatct
tatcaaatgggaatttttcgaatactcgccggcatccttcacttaggcaatgttggattt
acatctcgagattcagacagttgcgcaatccctcccaaacacgaacctctgagcatcttc
tgtgacctcatgggcgtggattatgaggagatgtcccactggctctgccaccggaagctg
gccacggccaccgagacatacatcaagcccatctccaagctgcaggccacaaatgcccgc
gacgctttgtccaagcacatctatgccaagcttttcagctggattgtagatcatgtcaat
caggcgctccactctgctgtgaagcagcactcttttattggggtactggacatttatggg
tttgaaacatttgagataaatagttttgaacagttttgcataaattatgcaaatgagaaa
ctacagcaacaattcaacatgcatgtcttcaaactggaacaagaagaatatatgaaagaa
caaatcccgtggacactcatagatttttatgataatcagccatgtattaatctaatagaa
tcaaagctgggtattctagacctgctggatgaggaatgcaagatgcccaaaggtacagat
gacacttgggcccagaaattgtacaacacgcacttgaacaaatgtgcactctttgaaaag
ccccgtctgtcaaacaaagctttcatcatccaacattttgctgacaaagttgaataccag
tgtgaaggctttcttgaaaagaacaaagatactgtttttgaagaacaaattaaggttctt
aagtcaagcaagtttaagatgctaccagaactttttcaagatgatgaaaaggccatcagc
ccaacatcagccacctcttcgggacgcacacccctcagccgcactccggtaaagcccacc
aaaggcagaccaggccagatagccaaagagcacaagaaaacagtggggcaccagttccgc
aactcccttcacctgctgatggagaccctcaatgccaccacccctcattatgtacgctgt
atcaagcccaatgacttcaagtttcccttcacgtttgatgagaagagggccgttcagcag
ctgagagcatgcggcgtcctggaaaccatccgaatcagtgcagcaggcttcccctcccgg
tggacttatcaggaatttttcagccgttaccgcgtcctaatgaagcaaaaggatgtactg
ggtgacagaaagcaaacctgcaagaatgtgttagagaaactcatactggacaaggacaaa
tatcagtttggtaagacaaagatctttttccgggctggtcaagtggcctatctagaaaag
ctcagggcagacaaactgagggctgcctgcatccggatccagaaaaccatccgagggtgg
ctgctgaggaagaagtacctgcggatgcagagggccgccatcactgtgcagagatatgtg
cggggctaccaggctcgatgttatgctaagtttctgcgcagaaccaaggcagccaccatc
attcagaagtactggcgcatgtatgtggtccgcaggaggtacaaaattagacgagctgcc
actattgttcttcagtcacgtttgcgaggctacttggccagaaaccactatcacagaata
ctccgtgagcacaaagcagtcatcattcagaagtgggtccggggctggctggctcgcaaa
cactacaagaggagcctgcgagccatcatctaccttcagtgctgctttcggcggatgatg
gccaagcgtgagctaaagaaactcaaaatcgaggctcgctctgtggagcgctacaagaag
ctccacattggcatggagaacaagatcatgcagctgcagcgtaaggtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccagtctggaaggagcatacagctctgag
actgagaaattacgaaatgacttagaacgtctccagctaagcgaagaggaggctaaggtt
gccactggacgggtcctgagtctacaggaagaaattgccaaacttcggaaagacctggaa
caaacccagtcagagaaaaaatccattgaggaacgagctgataaatataaacaagaaacc
gagcagctggtatcaaacctgaaggaagaaaacagtttgctgaaacaggagaaagaagtc
ctcaatcaccgcattgtggagcaggcgaaggagatgacagaaacgatggagaagaagtta
gtagaagaaacaaaacaactggaacttgatctaaatgatgagcggctgaggtatcaaaac
cttctgaatgagttcagtcgccttgaagaacgatatgatgacctcaaggaagagatgacc
ttgatggtgaatgtgcctaagcctggacacaagagaacagattctacccacagcagcaat
gagtctgaatatacctttagctctgaaatggcagaaacagaagacatcccatcaaggaca
gaggagccaagtgaaaagaaagtgcctctggacatgtccttgttcctcaagctacagaag
cgagtcacagagctggagcaggagaagcaggtgatgcaggatgagctcgaccgcagggag
gagcaagtgctgcgcagcaaggccaaggaagaagaaagaccacaacttagaggtgcagaa
ctggaatatgagtccctcaagcgtcaagaactagagtcagaaaacaagaaactgaaaaat
gagctcaatgagttacgcaaagccctcagtgagaaaagcgctccagaggtgacggctccc
ggtgcgcctgcctaccgcgtcctcatggagcagctgacctcggtgagtgaggagctggac
gtccgcaaggaggaggtcctcatcctgcggtctcagctggtcagccagaaagaggccatc
cagcccaagaatacaatgacagatgccacaatacttttggaagatgtacaaaaaatgaaa
gacaaaggcgaaatagcacaagcatacattggtttgaaggaaacaaacagatcatctgct
atggattgccatgagttgaatgaggatggagagctgtggctggtttatgaagggttaaaa
caagccaacaggctcttggaatcccagctgcagtcacagaagaggagccatgagaacgag
gccgaggccctccgtggggagatccagagcctgaaggaggagaacaatcggcagcagcag
ctgctggcccagaacctgcagctgcccccagaggcccgcatcgaggccagcctgcagcac
gagatcactcggctgaccaacgagaacctgtattttgaggaattatatgcagatgaccct
aagaagtatcagtcctatcggatttcactttacaaacggataattgatctgatggaacag
cttgaaaaacaggataagactgtccggaaactaaaaaaacaactgaaactatttgccaag
aaaattggtgaactggaagtgggccagatggagaacatatctcccgggcagatcatcgat
gagcccatccgtccagtcaacattcccaggaaagaaaaggatttccaaggaatgctggaa
tacaagaaggaggatgagcagaagctggtcaagaacctgattctcgaactgaagccacgt
ggtgtagcagtcaacttgatcccagggctaccagcgtacatcttgttcatgtgtgtgaga
catgctgactacctgaacgatgatcagaaagtgaggtcattgctcacatcaacaatcaac
agcatcaaaaaagtgttgaagaaaagaggtgatgattttgaaactgtctccttctggctc
tctaacacatgccgatttttgcactgtttgaagcagtacagtggagaagagggcttcatg
aagcataacacatctcgccagaatgaacactgcctcaccaattttgaccttgctgagtat
cggcaagtgctgagtgacttggccattcagatttaccaacagctggtacgggtgttagag
aacatccttcagccaatgatcgtgtcaggcatgctggagcacgagacgattcagggcgtg
tctggggtgaagcccacgggcctcaggaagcgcacctccagcatcgctgatgaaggcact
tacacattggactccatacttcggcagctcaactccttccactcagtcatgtgccagcat
ggtatggacccagagctcatcaagcaggtagccaaacagatgttctacatcgtgggggcc
gtcaccctgaacaacctcctcctgcgcaaggacatgtgctcctggagtaaaggcatgcag
atcaggtacaatgtcagtcaactggaggaatggttacgtgacaagaatctgatgaacagc
ggagccaaggagaccctagagccgctcattcaggctgctcagcttctgcaagtgaagaag
aaaacggatgacgacgcggaagccatctgctccatgtgtaatgctctaaccactgcccag
attgtcaaagtattgaatttgtacactccagttaatgagtttgaagaaagagtctctgta
tcattcattcgtaccatacaggtgcgtttacgagacaggaaggactctcctcaactgctt
atggatgccaagcacatctttcctgtcaccttcccttttaacccatcttccctcgcccta
gaaaccatccagatcccggccagccttggcctgggcttcatctcgcgggtctga
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integrated database retrieval system
