Perognathus longimembris pacificus (Pacific pocket mouse): 125340501
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Entry
125340501 CDS
T08928
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125340501 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125340501 (Myo5c)
04131 Membrane trafficking [BR:
plop04131
]
125340501 (Myo5c)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125340501 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125340501 (Myo5c)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125340501 (Myo5c)
mRNA cycle factors
P-body specific factors
125340501 (Myo5c)
Membrane trafficking [BR:
plop04131
]
Others
Actin-binding proteins
Myosins
125340501 (Myo5c)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125340501 (Myo5c)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125340501 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
NPHP3_N
AAA_16
DUF5382
Motif
Other DBs
NCBI-GeneID:
125340501
NCBI-ProteinID:
XP_048188103
LinkDB
All DBs
Position
23:26303831..26358813
Genome browser
AA seq
1726 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPDEVWKSAELARDYRAGDRVLRLLLEDGTELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSKAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEVSFDESNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTSMGGNTVIEGVNDR
ADMVETQKTFTLLGFTEDFQMDVFTILAAILHLGNVQIAGVGSERSSISEDDRHLTVFCE
LLGLARGKVSQWLCNRKIVTSSETVVKPMTRAQAINARDALAKKIYAHLFDFIVEKINEA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRESKFHLCANFFQENPVSSSPF
GSMITVRSAKQIIKPNSRHFRTTVGNKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTQPELSFSDKKEVCKVV
LHRLIQDSNQYQFGKSKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
HAAVIIQQYFRGQQTVRKAITARALKEAWAAIVIQKHCRGYLVRSLYQLIRVATITIQAY
SRGFLARRSYRKMLEEHKAVILQKHARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLLEKLASLAALRAGDVEKAQKLEAELERAATHRHSCEEKDRRYREAVEEKLAR
LQRRNSELEAEQEQTQLKLREKTEELQEKMDALTKQLFDDVQKEEQRRLLLEKSFELKTQ
DYEKQVQCLKEEIKALKEEKTELCHQLEEERVTSEHLRGDVARLSKQAKTVSEFEKEIEL
LQAQKIDVEKHVQSQKREMREKMSEITRQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVMESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VARLMSENVMIPDFKQQISELEKQKQDLEVRLNEQSEKMKGKLEELSAQLPPGREEEGTQ
SKATEGQHEARVRATEQLLGTIWALQEAGEHSEAGQSQDEGQDLEEELDTKDRVIKKLQD
QVKTLTKTMEKANARHLSSGPKEFLGMLEYRREDEPKLIQNLILDLKPRGVVVNMMPGLP
AHILFMCVRYADALNDASMLKSLMNSAINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLR
QYSGEEEFMKHNSPRQNKNCLNNFDLSEYRQILSDVAIRIYHQFITIMEKNIQPIIVPGM
LEYESLQGISGLKPTGFRKRSSSIDDTDAYTITSILQQLSYFYSTMCQNGLDPELLRQAM
KQMFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQKSVATETLEPLSQ
AAWLLQVKKTTDSDAKEISECCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLN
NRGDSLQLMLDTKYLFPVTFPFSASPHALELIQIPSSFKLGFLTRL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtttggattccggatcctgacgaa
gtctggaagtcggccgagctagccagggactaccgagctggtgacagagtcctgcggctc
ctgctggaggatggcacggagctggattaccccgtggacccaggctcgctgcctccactt
cggaacccggacatcctcgtgggcgagaacgacctcacggccctcagctacctccacgag
cccgcggtgctccacaaccttcgcgtccgctttgcagagtccaagctcatctacacctac
agcggaatcattttggtggccatgaacccttacaaacagctgcccatctatggagacgcc
atcatccatgcttacagtgggcagaacatgggtgacatggacccacacatattcgcggtg
gcagaagaggcctacaagcagatggccagaaacaatcgaaaccaatccatcatcgtgagc
ggggagtcgggcgctgggaagacggtgtcggcccgctatgccatgaggtacttcgccacc
gtcagcaagtcaagcagcaaggctcacgtggaggacaaggtcctggcgtccaatcccatc
acagaggctgtgggaaatgccaagaccacgcgcaatgacaacagcagtcggtttgggaag
tatacagaagtcagcttcgacgagagcaatcagattataggggccaacatgagaacctac
ctgctggagaaatccagagtcgtcttccaatcagaaaacgagcggaattaccacattttc
taccagctgtgtgcgtctgcacagcagtcggagtttaaacatctgaagctggggagcgca
gaagagtttaactacacaagcatgggaggcaatacagtcatcgagggtgtgaatgacaga
gcggacatggtagagacgcagaagacgttcacactcctgggcttcacggaggattttcag
atggatgtgttcaccatcctagccgccatcttgcacctgggcaacgtgcagatcgccggg
gtgggcagcgagcggtcttccatcagcgaggacgaccgtcacttgacggtattctgcgag
ctgctgggcctggcacgtggcaaagtgtctcagtggctgtgcaaccgcaagattgtcacc
agctctgagacagtggtgaagcccatgaccagggcccaggccatcaatgcccgggacgca
ctggccaaaaagatctatgcgcacctgtttgacttcattgtggagaaaattaacgaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtgaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatacatgaaggaggacatc
ccttggacgctgatcgatttttatgacaatcagccggttattgacctgatcgaagcaaaa
atgggcattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaat
tggcttcaaaagctgtataataattttgtcaacaagaactctttatttgagaaacctaga
atgtcaaacacatctttcatcatccagcactttgctgataaggtggagtataaatgtgaa
ggctttcttgagaagaacagggacactgtctatgacatgctggttgaaatcctgagagaa
agcaagttccatctgtgcgccaactttttccaagaaaatccagtttcttcttcccccttc
ggttcaatgatcacagtgagatccgcaaagcaaatcatcaagcccaacagcaggcatttc
cggaccacggttgggaacaagttccgcagctccctgtccctgctcatggagaccctcaat
gccaccacaccccactacgttcgctgcatcaagccaaatgatgagaagctgccttttgag
tttgactccaaaaggattgtccagcagctacgagcctgcggtgttttagaaacgattcgc
atcagtgcccagagctacccatccaggtggacgtacattgagttctacagccgctacggc
atcctcatgacccagccggagctctccttcagcgacaaaaaggaagtgtgcaaggtggtc
ttgcacaggctcatccaggattccaatcagtaccagtttggtaaaagcaagattttcttc
cgagcgggacaggtggcttacctagagaaactccgattggataaactgaggcagggctgt
atcgtgatccaaaagcatgttcgtggctggctgcagaggaagaagttcctccgggagaga
cacgccgctgtgatcatccagcagtacttccggggccagcagacagtgaggaaagccatc
actgcaagggctttgaaggaggcctgggcagccattgtcatccagaagcactgccgcggg
tacctggtccgcagcctgtaccagctcatccgcgtggccaccatcaccatccaggcatat
tcccggggcttcctggccaggaggagctaccggaagatgctggaggagcacaaggctgtg
atccttcagaaacacgcccgggcgtggctggcccgccgccgattccagaacatccgccga
ttcgtgctcaacatccagctcacttacagggtccagcgtttgcagaaaaagctggaggat
cagaacagagagaaccacgggctgctggagaagctggccagcctggccgcgcttcgggcc
ggagacgtggagaaggctcagaagctggaggcggagctggaaagagcagccacccacaga
cacagctgcgaggagaaggacaggagatacagggaggccgtggaagagaaactggccagg
cttcagaggcggaattccgagctggaggccgagcaggagcagacccagctgaagctccgc
gagaagacagaagagctccaagaaaaaatggatgccctcaccaagcagctctttgatgat
gtgcagaaagaagagcaacgaaggctactgctggagaaaagttttgagctgaagacacaa
gactatgagaagcaggtgcagtgtctgaaggaagaaatcaaagctctgaaggaggagaaa
acagagctctgtcaccagctggaggaggagcgcgtcacctctgagcacttgaggggggat
gtggcccgactgagcaagcaggcaaagaccgtctctgagtttgagaaggagattgagctg
ctccaagcacagaagatagacgtggaaaaacacgtgcagtcacagaagcgggagatgaga
gaaaagatgtcggagattaccagacagcttctcgagagctatgacattgaggatgtaaga
agcagactctctgtggaagatctggaacatttaaatgaagatggagaactctggtttgca
tacgagggactaaagaaggccacacgagttatggagagccatttccagtcccagaaggat
tgctacgaaaaagagattgaagccctgaacttcaaagtggtgcatctaagtcaagaaatc
aaccatctgcagaagttattcagggaggaaaatgacatcaatgaaagcatacggcatgaa
gtcgccaggctgatgtcagaaaacgtgatgatcccagactttaaacagcaaatttcagag
ctagagaagcagaagcaagatcttgaagtccgcctgaatgaacaatctgagaaaatgaaa
ggaaaactggaggagctgtctgctcagctccctcccggccgggaagaggaaggaacgcag
agcaaggccacagaaggccagcacgaagcccgggtcagagctaccgagcagctgctgggc
accatctgggcactccaggaggctggcgagcactcggaggcggggcaatcccaagatgaa
ggccaagatcttgaagaagaattagacacgaaggaccgagtgattaagaagctacaagac
caagtgaagactctgaccaagaccatggagaaagccaacgccaggcacttgtcctcgggg
cccaaggagttcctggggatgctggagtacaggagagaggacgagcccaagctcattcag
aacctcatccttgacttgaagccccgcggcgtggtggtgaacatgatgccggggctgccg
gctcacatcctgttcatgtgtgtccgctacgcggacgccctcaatgacgccagcatgctc
aagtccctcatgaacagcgccattaatggcatcaagcaggtggtgaaggaacatctagaa
gactttgagatgctgtccttttggctttccaatacttgtcacttcctcaactgcctcagg
caatacagtggtgaagaggaattcatgaaacataacagtccccgtcagaataagaattgc
ctgaacaactttgacctttcagaatacagacagattcttagtgatgtggctatacggata
taccaccagttcattaccataatggaaaagaacatccaaccaataatagtgccgggcatg
ctggagtacgagagtctgcagggcatctcaggcctgaagcccacgggcttccggaagcgc
tcgtccagcatcgacgacacagacgcctacaccatcacgtccatcctgcagcagctcagc
tacttctacagcaccatgtgccagaacgggctggaccccgagctgctgcggcaggccatg
aagcagatgttcttcctgatcggcgccgtcaccctgaacagcctcttcctgcgcaaggac
atgtgctcatgccggaaggggatgcagatcagatgcaacatcagctacttggaagaatgg
cttaaagacaagaacctgcagaagagcgtggccacggaaacgctggagcccctctctcag
gcggcgtggctgctccaggtgaagaagacaacggacagcgatgccaaggagatctctgag
tgctgtacctcgttatcggccgtgcagatcataaagatcctgaattcctacacgcccatc
gacgacttcgagaagagagtcactccgtccttcgtccgcaaagtgcaggctctcctgaat
aaccggggcgactcattgcagctcatgctggacaccaagtacctgtttccagtcaccttt
cccttctccgcctctcctcacgcgctcgagctgatccagatccctagcagtttcaagcta
ggctttctcactcgattgtag
DBGET
integrated database retrieval system
