Perognathus longimembris pacificus (Pacific pocket mouse): 125340517
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Entry
125340517 CDS
T08928
Symbol
Nedd4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
plop04144
Endocytosis
plop04530
Tight junction
plop05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125340517 (Nedd4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125340517 (Nedd4)
09144 Cellular community - eukaryotes
04530 Tight junction
125340517 (Nedd4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125340517 (Nedd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125340517 (Nedd4)
04121 Ubiquitin system [BR:
plop04121
]
125340517 (Nedd4)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125340517 (Nedd4)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125340517 (Nedd4)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125340517 (Nedd4)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
HECT type E3
125340517 (Nedd4)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
125340517 (Nedd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
2OG-FeII_Oxy_4
Motif
Other DBs
NCBI-GeneID:
125340517
NCBI-ProteinID:
XP_048188126
LinkDB
All DBs
Position
23:24533824..24594037
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AA seq
900 aa
AA seq
DB search
MATSAVEVFGLQEDEENSRIVRVKVIAGIGLAKKDILGASDPYVKVTLYDPMNGVFTSVQ
TKTIKKSLNPRWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRM
ERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPKTSGSEEDNAEQAEELEPGWVVLDQPDA
ACHLQQQQEPSPLPPGWEERQDVLGRTYYVNHASRRTQWKRPTLRDDLTDAEDGDMELQA
QRAFTTRRQISEEAEGLDPRDTSENWEVIREDEAAMYSGQSFPSPPTSSNPDTHFHLAEE
LNSRLTMYGNSATSQPMSSSNHSSRRGSLQTYSFEEQPTLPVLLPTSFGLPPGWEEKQDE
RGRSYYVDHNSRTTTWAKPTTQATTETSQLPTSQSSAGPQPLLPASDPVLQVTKPSAVEQ
GFLPTGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHLRGKPSLDPPNDLGPLPPGWE
ERTHTDGRIFYINHNIKRTQWEDPRLEHVAITGPAVPYSRDYKRKYEFFRRKLKKQNDIP
NKFEMKLRRATVLEESYRRVMSVKRTDLLKARLWIEFDGEKGLDYGGVAREWFFLISKEM
FNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPF
YKMMLQKPITLHDMESVDGEYYNSLRWILENDPTELDLRFIIDEELFGQTHQHELKNGGS
EIVVTNKNKKEYIYLVIQWRFVNRIQKQMSAFKEGFFELIPQDLIKIFDENELELLMCGL
GDVDVNDWREHTKYKNGYCANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAE
LYGSNGPQSFTVEQWGAPEKLPRAHTCFNRLDLPPYGSFEELWDKLQMAIENTQGFDGVD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcaactagcgccgtggaggtgttcgggctccaggaggacgaggaaaattcacgaatt
gtgagagtgaaagttatagccggaataggccttgctaagaaagatatcttgggagcgagt
gatccttatgtgaaagtgacgttatatgaccccatgaatggagtttttacaagtgtgcag
acaaaaaccattaaaaagtctttgaatccaagatggaatgaagaaatactgttcagagtc
catccccagcagcaccggctcctctttgaagtgtttgatgaaaaccgattgacaagagat
gattttctaggtcaagtggatgttcctctgtatccattaccgacagaaaatccaagaatg
gagagaccatatacatttaaggattttgttcttcacccaagaagtcataaatcaagagtg
aaaggttatctgagattaaaaatgacttatttacctaaaaccagcggctcagaagaagat
aatgctgaacaggcagaggaattagagcctggctgggttgttttggaccaaccagacgct
gcctgccatttgcagcagcagcaagaaccttctcctcttcccccaggatgggaagagagg
caggacgtcctgggaaggacctactacgtaaaccatgcgtcacggagaacacagtggaaa
agaccaactctgcgggatgacctaacggatgctgaggacggggacatggagctgcaagca
cagcgagccttcactacccggaggcagatatccgaagaagcggaaggcctggatcctcgg
gacacctctgagaactgggaagtgataagagaagatgaagccgccatgtacagtggtcag
tccttcccatcaccgccgacatcgagtaaccccgacactcactttcaccttgcagaagaa
ttgaattccagactcaccatgtatggcaattcagctaccagccagcccatgtccagctca
aatcattccagcagaagaggcagtttacaaacctattcttttgaggaacagcctacactt
cctgtgcttctgcctacttcgttcggattgccgcctgggtgggaagagaaacaagatgaa
agaggaagatcctattacgtcgatcacaattctagaaccaccacctgggcaaagcccacc
acacaggccacaacggagaccagtcagctgccgactagccagagctctgccggccctcag
ccgctgcttcctgccagtgacccagtgttgcaagtgacaaaaccatccgcagttgaacaa
ggattccttccgacaggctgggaagtccgccatgcaccaaatggaaggcccttctttatt
gaccacaacaccaaaaccaccacctgggaagatccaagattgaaaatcccagctcatctg
agagggaaaccttcattggacccacctaacgatctaggacctttacctccaggatgggaa
gaaaggacccacacggatggaaggatcttctacataaatcacaatataaaaagaacccag
tgggaagaccctcgcttggagcatgtcgccattactggaccagcagtaccttactccaga
gattacaaaagaaagtatgagttcttccgaagaaaattgaagaagcagaatgacattcca
aacaaatttgaaatgaagctccgccgggcgacggttctagaggagtcctaccggagagtg
atgagtgtcaagagaaccgacctcctcaaggctcggctctggatcgagttcgatggggag
aagggcttggactatggaggagtcgccagagaatggttcttcctcatctcaaaagaaatg
tttaacccctactatggattgtttgaatattccgctacggataattacaccctacagata
aaccctaactcgggcctgtgtaacgaagatcatctctcttacttcaagttcattggtcgg
gtcgccgggatggctgtttatcatggcaaactcttagatggtttcttcatccgccctttc
tacaagatgatgctacagaaacccataacgcttcatgacatggagtcagtggatggtgaa
tattataattcgctaagatggattcttgaaaatgatccaacagaactggacctcaggttc
atcatcgacgaggaactttttggacagacacatcaacatgagttgaaaaatggcggatca
gaaatcgtggtcaccaataagaacaaaaaggaatatatttaccttgtaatacaatggcgg
tttgtcaaccgaatccagaagcagatgtctgcttttaaagagggcttttttgaactaata
ccacaggatctcatcaaaattttcgatgaaaatgaactagagctccttatgtgtggattg
ggggacgtcgatgtgaatgactggagagaacacaccaagtataaaaacggctactgtgcc
aatcaccaagtcatccagtggttctggaaggccgtgttaatgatggactcggagaagaga
atacggctgctgcagttcgtcaccggcacatcccgggtgcccatgaacgggtttgccgag
ctctacggctcgaatggaccacagtcctttacggtggagcagtggggtgcccctgagaag
ctgccccgagcacacacctgcttcaatcgcttggacctgccgccctatggctcctttgaa
gaattatgggataagctgcagatggcgatcgaaaacactcagggtttcgatggagttgat
taa
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