Perognathus longimembris pacificus (Pacific pocket mouse): 125340533
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Entry
125340533 CDS
T08928
Name
(RefSeq) ATP-binding cassette sub-family A member 17-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125340533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125340533
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125340533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
125340533
NCBI-ProteinID:
XP_048188151
LinkDB
All DBs
Position
23:complement(16090148..16141529)
Genome browser
AA seq
1716 aa
AA seq
DB search
MTVSRKLKLLLWKNFVLKKRKTLITVLEILMPLLFSALVLYLRFSSVPKPRPRTDYHPFD
VTSLPEFFYNYPVKTKFQLVYIPSKSETLKALTEMVEQTFDVEFEVLGFSSVPSFESYII
KDPRAFYALVGIVLGHNFSDSNEPLPLAVEYNLRFSYIQRNFLSLKHVYFQADLEGWCTS
FLYPPYPSQEPREFTYADGGTPGYHKEGFLAIQHAVDKAIMRHHAHNATVTMFESLSVLL
QRFPYGPHIQDRFFMVLQNEFPLLLMLSFISIELIIINSITLEKEKKLKDYMCMMGLESW
IHWIAWFIMFFISVLIAVTVMTILFCTKIKNVAVFRNSDPSLIFVFLTCFAIATIFFAFM
MSTFFQKAHVGTAIGGTVFFFTYLPYLYLTFSYHQRSYSQKISFCLFSNVAMAMGIRFIS
RFEAEGTGLQWKNMGSITGEFSFTQVLLMLLLDSFLYCLITWYMENIFPGNFQTSKPWYF
FALPSYWLGNHIPVTRPLLHLEDSKKTPGSQFMQEEPTDLIRGIEIHHLYKVFHRGRNKY
IAVRDLNMNMYRGQITVLLGHNGAGKSTTCSMLTGLIIPSSGQAYINGYEISTDMVQIRK
NMGWCPQNDILFENFTVAEQLSFYAQLKGLSPQKCAEEVKQMLDTLSMKDKWSSRCKFLS
GGMRRKLSIGIALIAGSKLLILDEPTSGMDAISRRAIWDLLQQQKSDRTILLTTHFMDEA
DLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYYMTLLKTPFCNTEKLCRLIYHHIPNAIL
ESDVAEELIFILPKEITHRYESLFADLELQKVELGISSFAASVTTMEEVFIRVCMLANCS
SHRTTKEHHTRQPYPLISRVPVDRIKELHSRIFSIQTGLPIKLNTGFSLFCQQFYAMLLK
RVTYSWRNWMLMLSVQILVPLVILVLTLMFFNFKTKSLESVPLELTLKSYGQTIVPFFVS
QNFTLDPQLSNRFADMLKAEGQIPLQVSDPIEEFLLRKAKEEPENFDKQYVVAASFEVID
NDTIVTALFNNQAYHSPAVALALVDNLLFKLLSGASASITSFNYPQPQTEEEVSESLLYQ
GAKGYYLIINLLFGIAFLSSSFSILTVRERRVKSKQVQFVSGVCITAFWFSALLWDLISF
LIPTLLILVVFFYYNEEAFTQHGNAPAVVLVLMLYAWALIPFIYMVSFPFDNAGLGYTEI
SESLDHIFLILPGHCLGMAFFNLYHNFELKKFCSAKNLDDIECNEVSEGYVVQKNIYAWE
ALGMGKYLTALAISGPLHIILLFLVETNVFKILKAKLYDFFRKQDLAMYLRPESEDQDVE
EEVRTIKNYLETLCKTNPLVVKEVSKVYDVKVPLLAVNKVSFTIQTKECFGLLGLNGSGK
TSIFKMLTGQKPTTSGDAFVKGFSISSQLGKVRQFIGYCPQFDALPNFMTGRETLIMYAR
IRGIPESHINICVKQIIDDFVMLMYADKLIKTYSGGNKRKLSIGIALIGEPAVIFLDEPS
TGLDPVARRLLWDTVARVRESGKAIVITSHSMEECEALCSRLAIMVQGQFKCLGSPQHLK
NKFGGGYSLKAKFHSKGQQEALEEFKAFMDLTFPDSILEDEHQGLVCYHLPGYNLIWSKV
FGLMEKAKRKYKLEDYSINQVSLEDVFLGFINPIGPTQRKDQEQADSDNTSSFSLPLPLL
PQPSSPSSSHLSLFSPHPSQPPLNPPSPSSSKIIPL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtccaggaagttaaagcttcttctctggaaaaattttgtattaaagaagcgg
aagactctcataacagtgcttgaaatcttgatgccattactcttttctgcacttgtgttg
tatcttcgtttcagcagtgttccaaaaccaagacctcgtactgactaccacccatttgat
gtcacttcactgccagaattcttctataactatccagtgaaaactaaatttcaactagtt
tatattccttccaaaagtgaaactttgaaagctctcactgaaatggtggaacaaaccttt
gacgttgagttcgaagttctaggattttcttcagtgccctcgtttgaaagttatataatt
aaggatcccagagctttctacgcattggtggggattgttttgggccataatttcagtgac
agcaatgaacctttgccacttgcggttgagtacaacttgcgctttagttacattcagagg
aattttttatctttgaaacatgtgtattttcaagctgacttggaaggctggtgtacatcc
tttctttatcctccttacccaagccaagaaccccgggaatttacatatgctgatggagga
actcctggctaccataaagaaggctttctggccatacagcatgctgtggataaagccatc
atgaggcaccatgctcacaatgcaacagtcaccatgtttgagagtctcagtgtactattg
cagaggttcccctatggacctcatatccaggacaggttcttcatggtgcttcagaatgag
ttccctcttctcctcatgctcagcttcatttccatcgagctcatcatcattaattccatt
acattggaaaaggagaaaaaacttaaggactatatgtgtatgatgggactggagagctgg
atacattggattgcttggttcatcatgttctttatttctgtcctcattgccgttactgtt
atgaccattctcttctgcacaaagataaaaaatgtggctgtcttcaggaacagtgaccct
agtttgatatttgtttttctaacatgttttgccattgccacaattttctttgcattcatg
atgagcacattcttccaaaaagcccatgttggaactgccataggagggactgtcttcttc
tttacctacctcccttacctgtacctcacttttagctaccaccagaggagctatagccag
aagatcagcttttgtctcttctcaaatgttgccatggcaatgggaatccgattcatctct
aggtttgaggcagaaggcacaggcttgcagtggaagaacatgggcagtatcacaggagag
ttcagcttcactcaggtgctgctgatgctcctcttggactcattcttatactgtctgata
acctggtacatggagaacattttcccagggaactttcaaacatccaagccttggtacttc
tttgccttgccttcctactggcttgggaaccatattccagtgacaaggccgctgctgcac
ctggaagattctaagaaaactccgggaagtcagttcatgcaggaagagccaactgatctg
ataagagggattgaaatccatcatctatacaaggtgtttcacaggggaaggaataaatac
atagcagtcagagatctgaacatgaatatgtacagggggcagatcactgtgcttctggga
cacaacggagctggaaaatctactacctgctccatgctcacaggtcttattatcccttca
agtggacaggcttatatcaatggatatgaaatttcaacagacatggttcaaattcggaag
aacatgggctggtgtccccagaatgatatcttatttgaaaactttacagtagcagaacag
ctttctttctatgctcagctgaaaggcctgtcaccccagaagtgtgctgaagaagtcaag
cagatgctagacaccctcagtatgaaggacaagtggagttcacggtgcaagttcctgagt
ggagggatgaggcgcaaactctccattggcatcgccctcatagcaggttccaagttgttg
attctggacgagcccacctcgggcatggacgccatctctaggagggccatctgggacctt
cttcagcagcagaagagtgaccgcaccatcctactgaccacgcacttcatggacgaggct
gacctgctgggggaccgcattgccatcatggccaaaggggagctgcagtgctgtgggtcg
tctctgttcctcaagcagaaatatggtgcaggatactatatgactttactgaaaacacct
ttctgtaacacagagaagctctgtcgtcttatctatcatcacataccaaatgcaattttg
gagtctgatgttgcagaagaattaatatttatacttcctaaagagatcacacacaggtat
gaatctctatttgctgacctggaactgcaaaaggtagagctgggaatctccagctttgcg
gcctccgtcaccaccatggaggaagtgttcattagggtttgtatgttggcaaattgcagt
tcacatagaacaactaaggagcatcacactcgccagccatatcctctgattagcagagtc
cctgttgacagaattaaagaacttcactcaaggatcttctcaatacagactggcctgcca
atcaaactaaatactggcttcagtcttttctgccaacaattttatgccatgctcctgaag
agagtcacatattcttggcggaactggatgttgatgttatctgtacagatcctggtgcct
ctggttatccttgtattaaccctcatgttcttcaacttcaaaacaaagagcctggagagc
gttcccttggagttgactctaaaatcatatggtcagactattgttccattctttgtttct
cagaacttcaccctggatcctcagctttcaaatcgctttgcagatatgcttaaggctgag
gggcagattcctctgcaggtctcagaccccatagaggagttcctgttaagaaaggcaaaa
gaggagccggaaaacttcgataagcaatatgtggtggcagcttcgtttgaagtcatagac
aatgacaccatagtgactgcgctgttcaacaaccaggcgtaccattcccctgcagtggct
ctggctctagtagacaatctgctcttcaaattgctttctggtgccagtgcttccattacc
tccttcaactaccctcaacctcagacagaggaggaggtctccgagagcctcctgtaccag
ggcgctaaaggatattatcttattatcaacttgctttttgggatagcttttctgtctagc
tctttttccatcttgacagtcagagagagacgtgttaagtccaaacaggtccagtttgta
agcggagtctgcataactgcattctggttttctgctctgctgtgggacctcatctccttc
ctcattcccactctactgatactggtggtgtttttttactacaatgaggaagctttcacc
cagcatgggaacgctccagctgtagtcttggttctgatgctctacgcctgggccctcatc
cccttcatctacatggtcagcttcccctttgacaatgctgggctgggctacacagaaatc
tctgagtccttggatcatatattcctcatacttccagggcactgcttagggatggccttt
ttcaacttgtatcacaactttgaactaaaaaaattttgcagtgccaagaacctggatgat
attgagtgcaatgaagtttcagaaggatatgtggtccaaaagaacatctatgcctgggag
gcccttggaatgggaaagtacttgacagccctggccatctcaggacctttgcacattatt
ctgcttttccttgttgaaaccaatgtcttcaagatactgaaagccaagctttatgacttt
ttcaggaagcaagatttggcaatgtacctcagaccagagtctgaagaccaagatgtagaa
gaagaagtgagaaccatcaagaattatttggaaacattgtgcaagacaaatccattagtt
gttaaagaagtgtcaaaggtctatgatgtcaaggttcccttgctagctgtgaacaaagta
tcctttaccattcaaacaaaagaatgctttggccttcttggcctcaatggatctgggaag
acttccattttcaaaatgctgactggacagaagcccaccacttctggggatgcctttgtc
aagggtttcagcatcagctctcaattagggaaggtgcggcagtttattggttactgtcct
cagtttgatgccctgccaaacttcatgacaggccgagagacactgattatgtatgcccgg
atccgaggcatcccagagagtcacatcaatatctgtgtgaagcaaattattgacgacttt
gtcatgctgatgtatgcagacaagctgataaagacttacagtggtggtaacaagcgaaag
ctgagcattggcatcgccctcattggagagcctgcagtcatcttcctggatgagccatcc
actggcctggaccctgtggccagacgcctgctgtgggacactgtggcccgggtccgggag
tctggcaaggccatcgtcatcacctcccacagcatggaggagtgtgaggccctgtgctcg
cggctggccattatggtgcagggtcagttcaaatgtctgggcagcccgcagcacctcaag
aacaaattcggaggtggctattccctgaaggccaagttccacagtaaagggcagcaggag
gctctggaggaattcaaggcatttatggacctgaccttcccagacagtatcctagaagat
gagcaccagggcttggtctgttaccatctacctggatacaacctcatttggtcaaaggtg
tttggccttatggagaaagccaagaggaagtacaagttggaagactactccatcaatcag
gtctccttggaggatgtcttcctgggcttcattaaccctataggacccactcaaagaaaa
gaccaagagcaggcagactcagacaacacctcatcattctcactgcctctcccactgctt
cctcagccttcctcaccttcttcctcacatctttcacttttctcacctcatccctctcag
ccccccttaaatcctccctccccatcttcctcaaagattatcccactataa
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integrated database retrieval system
