Perognathus longimembris pacificus (Pacific pocket mouse): 125340564
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Entry
125340564 CDS
T08928
Symbol
Thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125340564 (Thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125340564 (Thoc6)
03041 Spliceosome [BR:
plop03041
]
125340564 (Thoc6)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125340564 (Thoc6)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125340564 (Thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IP5PC_F
NBCH_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR54
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125340564
NCBI-ProteinID:
XP_048188213
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All DBs
Position
23:complement(15696835..15700428)
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AA seq
341 aa
AA seq
DB search
MERASLLAAPLGQTEVFQALQRLHMTIFSQSISPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTERHLLSAGDGEVKAWLWAEILKKGCKELWCRQPPY
RTSLEVPEINALLLIPKENSLMLAGGDCLLHTMDLETGSFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLTF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcttcgctgctcgcggctcctctgggtcagacagaggtgtttcaggccttg
cagcggctgcacatgaccatcttctcccagagcatctcaccctgtgggaagttcctggca
gctggcaacaattatggacagatcgctatcttcagcttgtctgctgctttgagttcagag
gccaaagaggaaagcaaaaagcctgtggtgaccttccaagctcatgatgggcctgtctac
agcatggtctccactgaaagacatctgctcagtgctggggatggagaggtgaaggcatgg
ctttgggcagagatcctcaagaagggctgtaaggagctgtggtgtcgccagcccccatat
aggaccagtctggaagtacctgagatcaatgccttgctgctcatccccaaggagaattcc
ctcatgctagctgggggagactgtttgctgcacactatggaccttgaaacggggagcttc
acgcgggcccttcggggccacactgactatatccattgcctggcactgcgggaacggagc
cccgaggtgctgtcaggtggcgaagatggggcagtgcgtctttgggacctccgcacagcc
aaggaggtgcaaacgatcgaggtctacaagcatgaggagtgctcaaggccccacaacggg
cgctggattggatgcttggcaactgactcagactggatggtctgtggagggggtccagct
cttactctctggcacctgcgatcctccacacctaccactgtcttccccatgcgggcacca
cagaaacacgtcacgttctaccaggacctgattctctcagctggccagggtcgttgtgtc
aaccagtggcaactgagcggggagctcaaggcccaggtgcctggctcctctcccgggctt
ctcagcctcagcctcaaccaacagccagcagcacctgagtgcaaggtcctgactgctgca
ggcaacagctgccgggtggatgtcttcaccaacctgggctaccgagccttctccttgact
ttctga
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integrated database retrieval system
